Re: Please some one write blog on gmt 5 installation

Finally I installed gmt5 but I could not find executable files such as psxy
blockmean etc in gmt5 bin directory only following I found

gmt-5.1.0-src/bin$ ls
gmt  gmt-config  gmtlogo  gmt_shell_functions.sh  gmtswitch  isogmt

when i tried psxy I could see psxy of 4.5.x version and gmt psxy then gmt5

if I have to use gmt5 whether I have to change all my programs ??? I mean
whether I have to add gmt in beginning ?

gmt psxy ......
gmt blockmean ....

-Peter




On Sat, Feb 1, 2014 at 12:37 AM, Peter <[email protected]> wrote:

> Thank you very much Marcelo ... Its working now.. if I face some problem..
> I will interrupt you again please don't mind :)
>
> Have a great day!
>
> -Peter
>
>
> On Sat, Feb 1, 2014 at 12:30 AM, Marcelo Banik <[email protected]>wrote:
>
>> Peter,
>>
>> I attached my ConfigUser.cmake, as you asked.
>>
>> Appears very similar with yours. I hope that just including ".." in cmake
>> will work.
>>
>> Regards,
>>
>> Marcelo
>>
>>
>> On Fri, Jan 31, 2014 at 4:42 PM, Peter <[email protected]> wrote:
>>
>>> Thank you so much for your quick response, I got it ../ is previous
>>> directory and where to define netcdf and hdf , gshhg and gcw ? can you
>>> send me your cmake file(ConfigUser.cmake) I can use it as reference..
>>>
>>> -Peter
>>>
>>>
>>> On Sat, Feb 1, 2014 at 12:06 AM, Marcelo Banik <[email protected]>wrote:
>>>
>>>> Hi Peter,
>>>>
>>>> Could not be the only problem, but the correct cmake command is:
>>>>
>>>> cmake -DCMAKE_INSTALL_PREFIX=/home/peter/software/gmt5 ..
>>>>
>>>> The ".." is very important here.
>>>>
>>>> Regards,
>>>>
>>>> Marcelo
>>>>
>>>>
>>>>
>>>> On Fri, Jan 31, 2014 at 4:26 PM, Peter <[email protected]> wrote:
>>>>
>>>>> Not working, Please someone help me... what I have to change in
>>>>> ConfigUser.cmake ? where to set netcdf and hdf ? what I am doing wrong ?
>>>>>
>>>>> I tried as you said
>>>>>
>>>>> $ tar -xf gmt-5.1.0-src.tar.gz
>>>>> $ cd gmt-5.1.0/
>>>>> $ cd cmake/
>>>>> $ cp ConfigUserTemplate.cmake ConfigUser.cmake
>>>>> $ cd ..
>>>>> $ mkdir build
>>>>> $ cd build
>>>>> $ cmake -DCMAKE_INSTALL_PREFIX=/home/peter/software/gmt5
>>>>> CMake Error: The source directory "/home/peter/gmt-5.1.0/build" does
>>>>> not appear to contain CMakeLists.txt.
>>>>> Specify --help for usage, or press the help button on the CMake GUI.
>>>>>
>>>>> $ cat ConfigUser.cmake
>>>>>
>>>>> #
>>>>> # $Id: ConfigUserTemplate.cmake 12425 2013-11-01 10:09:27Z fwobbe $
>>>>> #
>>>>> # Copyright (c) 1991-2013 by P. Wessel, W. H. F. Smith, R. Scharroo,
>>>>> J. Luis and F. Wobbe
>>>>> # See LICENSE.TXT file for copying and redistribution conditions.
>>>>> #
>>>>> # This program is free software; you can redistribute it and/or modify
>>>>> it
>>>>> # under the terms of the GNU Lesser General Public License as
>>>>> published by the
>>>>> # Free Software Foundation; version 3 or any later version.
>>>>> #
>>>>> # This program is distributed in the hope that it will be useful, but
>>>>> WITHOUT
>>>>> # ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
>>>>> # FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
>>>>> License
>>>>> # for more details.
>>>>> #
>>>>> # Contact info: gmt.soest.hawaii.edu
>>>>>  #
>>>>> ----------------------------------------------------------------------------
>>>>>
>>>>> # Use this file to override variables in 'ConfigDefault.cmake' on a
>>>>> per-user
>>>>> # basis.  First copy 'ConfigUserTemplate.cmake' to 'ConfigUser.cmake',
>>>>> then
>>>>> # edit 'ConfigUser.cmake'.  'ConfigUser.cmake' is not version
>>>>> controlled
>>>>> # (currently listed in svn:ignore property)
>>>>> #
>>>>> # Note: CMake considers an empty string, "FALSE", "OFF", "NO", or any
>>>>> string
>>>>> # ending in "-NOTFOUND" to be false (this happens to be
>>>>> case-insensitive, so
>>>>> # "False", "off", "no", and "something-NotFound" are all false).
>>>>>  Other values
>>>>> # are true.  Thus it does not matter whether you use TRUE and FALSE,
>>>>> ON and
>>>>> # OFF, or YES and NO for your booleans.
>>>>>
>>>>> ##
>>>>> ## Section 1: Installation paths
>>>>> ##
>>>>>
>>>>> #
>>>>> ============================================================================
>>>>> # Basic setup begins here.  All settings are optional.  In most cases,
>>>>> setting
>>>>> # CMAKE_INSTALL_PREFIX should be all you need to do in order to build
>>>>> GMT with
>>>>> # reasonable defaults enabled.
>>>>> #
>>>>> ============================================================================
>>>>>
>>>>> # Installation path (usually defaults to /usr/local) [auto]:
>>>>> set (CMAKE_INSTALL_PREFIX "/home/peter/software")
>>>>>
>>>>> # Set install name suffix used for directories and gmt executables
>>>>>  # [undefined]:
>>>>> set (GMT_INSTALL_NAME_SUFFIX "gmt5")
>>>>>
>>>>> # Install into traditional directory structure. Disable to install a
>>>>> # distribution type directory structure (doc and share separated) [on]:
>>>>> #set (GMT_INSTALL_TRADITIONAL_FOLDERNAMES OFF)
>>>>>
>>>>> # Install convenience links for GMT modules. Disable to install only
>>>>> the main
>>>>> # gmt program and access modules as "gmt modulename options" [TRUE]:
>>>>> #set (GMT_INSTALL_MODULE_LINKS FALSE)
>>>>>
>>>>> #
>>>>> ============================================================================
>>>>> # Advanced configuration begins here.  Usually it is not necessary to
>>>>> edit any
>>>>> # settings below.  You should know what you are doing if you do
>>>>> though.  Note:
>>>>> # installation paths are relative to ${CMAKE_INSTALL_PREFIX} unless
>>>>> absolute
>>>>> # path is given.
>>>>> #
>>>>> ============================================================================
>>>>>
>>>>> # Set binary installation path [bin]:
>>>>> #set (GMT_BINDIR "bin")
>>>>>
>>>>> # Set library installation path [lib or lib64]:
>>>>> #set (GMT_LIBDIR "lib")
>>>>>
>>>>> # Set include installation path
>>>>> [include/gmt${GMT_INSTALL_NAME_SUFFIX}]:
>>>>> #set (GMT_INCLUDEDIR "include/gmt")
>>>>>
>>>>> # Set share installation path [share or
>>>>> share/gmt${GMT_INSTALL_NAME_SUFFIX}]:
>>>>> #set (GMT_DATADIR "share/gmt")
>>>>>
>>>>> # Set doc installation path [share/doc or
>>>>> # share/doc/gmt${GMT_INSTALL_NAME_SUFFIX}]:
>>>>> #set (GMT_DOCDIR "share/doc/gmt")
>>>>>
>>>>> # Set manpage installation path [share/man or
>>>>> # share/doc/gmt${GMT_INSTALL_NAME_SUFFIX}/man]:
>>>>> #set (GMT_MANDIR "share/doc/gmt/man")
>>>>>
>>>>> # Install documentation files from this external location instead of
>>>>> creating
>>>>> # new PDF and HTML documents from scratch
>>>>> [${GMT_SOURCE_DIR}/doc_release]:
>>>>> #set (GMT_INSTALL_EXTERNAL_DOC OFF)
>>>>>
>>>>> # Install manual pages from this external location instead of creating
>>>>> the
>>>>> # manpages from scratch [${GMT_SOURCE_DIR}/man_release]:
>>>>> #set (GMT_INSTALL_EXTERNAL_MAN OFF)
>>>>>
>>>>> ##
>>>>> ## Section 2: Build dependencies (should only be needed if CMake cannot
>>>>> ## automatically detect the rights version or path.)
>>>>> ##
>>>>>
>>>>> # Set path to GSHHG Shoreline Database [auto]:
>>>>> #set (GSHHG_ROOT "gshhg_path")
>>>>>
>>>>> # Copy GSHHG files to $/coast [FALSE]:
>>>>> #set (COPY_GSHHG TRUE)
>>>>>
>>>>> # Set path to DCW Digital Chart of the World for GMT [auto]:
>>>>> #set (DCW_ROOT "dcw-gmt_path")
>>>>>
>>>>> # Copy DCW files to $/dcw [FALSE]:
>>>>> #set (COPY_DCW TRUE)
>>>>>
>>>>> # Set location of NetCDF (can be root directory, path to header file
>>>>> or path
>>>>> # to nc-config) [auto]:
>>>>> #set (NETCDF_ROOT "netcdf_install_prefix")
>>>>>
>>>>> # Set location of GDAL (can be root directory, path to header file or
>>>>> path to
>>>>> # gdal-config) [auto]:
>>>>> #set (GDAL_ROOT "gdal_install_prefix")
>>>>>
>>>>> # Set location of PCRE (can be root directory, path to header file or
>>>>> path to
>>>>> # pcre-config) [auto]:
>>>>> #set (PCRE_ROOT "pcre_install_prefix")
>>>>>
>>>>> # Set location of single precision FFTW (can be root directory or path
>>>>> to
>>>>> # header file) [auto]:
>>>>> #set (FFTW3_ROOT "fftw_install_prefix")
>>>>>
>>>>> # Set location of ZLIB (can be root directory or path to header file)
>>>>> [auto]:
>>>>> #set (ZLIB_ROOT "zlib_install_prefix")
>>>>>
>>>>> ##
>>>>> ## Section 3: GMT features
>>>>> ##
>>>>>
>>>>> # Enforce GPL or LGPL conformity. Use this to disable routines that
>>>>> cannot be
>>>>> # redistributed under the terms of the GPL or LGPL such as Shewchuk's
>>>>> # triangulation (valid values are GPL, LGPL and off) [off]:
>>>>> #set (LICENSE_RESTRICTED GPL)
>>>>>
>>>>> # Configure default units (possible values are SI and US) [SI]:
>>>>> #set (UNITS "US")
>>>>>
>>>>> # Enable file locking [FALSE]:
>>>>> #set (FLOCK TRUE)
>>>>>
>>>>> # Enable building of shared libraries [TRUE] (disable to use static
>>>>> libraries;
>>>>> # not recommended):
>>>>> #set (BUILD_SHARED_LIBS FALSE)
>>>>>
>>>>> # Build GMT shared lib with supplemental modules [TRUE]:
>>>>> #set (BUILD_SUPPLEMENTS FALSE)
>>>>>
>>>>> ##
>>>>> ## Section 4: Advanced tweaking
>>>>> ##
>>>>>
>>>>> #
>>>>> # Testing and development
>>>>> #
>>>>>
>>>>> # Enable running examples/tests with "ctest" or "make check"
>>>>> (out-of-source).
>>>>> # Need to set either DO_EXAMPLES, DO_TESTS or both and uncomment the
>>>>> following
>>>>> # line.
>>>>> #enable_testing()
>>>>> #set (DO_EXAMPLES TRUE)
>>>>> #set (DO_TESTS TRUE)
>>>>> # Number of parallel test jobs with "make check":
>>>>> #set (N_TEST_JOBS 4)
>>>>>
>>>>> # Enable this option to run GMT programs from within ${GMT_BINARY_DIR}
>>>>> without
>>>>> # installing or setting GMT_SHAREDIR and GMT_USERDIR first. This is
>>>>> required
>>>>> # for testing [OFF]:
>>>>> #set (SUPPORT_EXEC_IN_BINARY_DIR ON)
>>>>>
>>>>> # List extra sub-dirs of 'src' with a CMakeList.txt to build
>>>>> non-module codes
>>>>> # that link against the full gmt libs (not just the API; for building
>>>>> codes
>>>>> # that only need the GMT API, see the gmtextension project).
>>>>> #set (EXTRA_BUILD_DIRS apidemo)
>>>>>
>>>>> # Directory in which to install the release sources per default
>>>>> # [${GMT_BINARY_DIR}/gmt-${GMT_PACKAGE_VERSION}]:
>>>>> #set (GMT_RELEASE_PREFIX "release-src-prefix")
>>>>>
>>>>> # If set to false, image conversion from PS images to PNG and PDF does
>>>>> # not depend on the gmt binary target. Note: "make gmt" is then
>>>>> required
>>>>> # before docs_depends [TRUE].
>>>>> #set (GMT_DOCS_DEPEND_ON_GMT FALSE)
>>>>>
>>>>> #
>>>>> # Debugging
>>>>> #
>>>>>
>>>>> # Set build type can be: empty, Debug, Release, RelWithDebInfo or
>>>>> MinSizeRel
>>>>> # [Release]:
>>>>> #set (CMAKE_BUILD_TYPE Debug)
>>>>>
>>>>> # Extra debugging for developers:
>>>>> #add_definitions(-DDEBUG)
>>>>> #add_definitions(-DMEMDEBUG) # Turn on memory tracking see
>>>>> gmt_support.c for extra info
>>>>> #set (CMAKE_C_FLAGS "-Wall -Wdeclaration-after-statement") #
>>>>> recommended even for release build
>>>>> #set (CMAKE_C_FLAGS "-Wextra ${CMAKE_C_FLAGS}")            # extra
>>>>> warnings
>>>>> #set (CMAKE_C_FLAGS_DEBUG -ggdb3)                          # gdb
>>>>> debugging symbols
>>>>> #set (CMAKE_C_FLAGS_RELEASE "-ggdb3 -O2 -Wuninitialized")  # check
>>>>> uninitialized variables
>>>>> #set (CMAKE_LINK_DEPENDS_DEBUG_MODE TRUE)                  # debug
>>>>> link dependencies
>>>>>
>>>>> #
>>>>> # System specific tweaks
>>>>> #
>>>>>
>>>>> # This is for GCC on Solaris to avoid "relocations remain against
>>>>> allocatable
>>>>> # but non-writable sections" problems:
>>>>> #set (USER_GMTLIB_LINK_FLAGS -mimpure-text)
>>>>>
>>>>> # This may be needed to enable strdup and extended math functions with
>>>>> GCC and
>>>>> # Suncc on Solaris:
>>>>> #set (CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -D__EXTENSIONS__")
>>>>>
>>>>> # Do not warn when building with Windows SDK or Visual Studio Express:
>>>>> #set (CMAKE_INSTALL_SYSTEM_RUNTIME_LIBS_NO_WARNINGS ON)
>>>>>
>>>>> # Manually select runtime library when compiling with Windows SDK or
>>>>> Visual
>>>>> # Studio Express:
>>>>> #set (CMAKE_INSTALL_SYSTEM_RUNTIME_LIBS
>>>>> c:/Windows/System32/msvcr100.dll)
>>>>>
>>>>> # If your NetCDF library is static (not recommended, applies to
>>>>> Windows only)
>>>>> #set (NETCDF_STATIC TRUE)
>>>>>
>>>>> # If want to rename the DLLs to something else than the default (e.g.
>>>>> to
>>>>> # append the bitness - Windows only)
>>>>> #if (WIN32)
>>>>> # set (BITAGE 32)
>>>>> # # Detect if we are building a 32 or 64 bits version
>>>>> # if (CMAKE_SIZEOF_VOID_P EQUAL 8)
>>>>> #   set (BITAGE 64)
>>>>> # endif ()
>>>>> # set (GMT_DLL_RENAME gmt_w${BITAGE})
>>>>> # set (PSL_DLL_RENAME psl_w${BITAGE})
>>>>> #endif(WIN32)
>>>>>
>>>>> # On Windows Visual C 2012 needs _ALLOW_KEYWORD_MACROS to build
>>>>> #if(MSVC11)
>>>>> #  add_definitions(/D_ALLOW_KEYWORD_MACROS)
>>>>> #endif(MSVC11)
>>>>>
>>>>> # vim: textwidth=78 noexpandtab tabstop=2 softtabstop=2 shiftwidth=2
>>>>>
>>>>> -Peter
>>>>>
>>>>>
>>>>> On Fri, Jan 31, 2014 at 8:10 PM, Joaquim Luis <[email protected]> wrote:
>>>>>
>>>>>> No.
>>>>>>
>>>>>> GMT5 use cmake not autotools as the building system so this won't
>>>>>> work.
>>>>>>
>>>>>>
>>>>>>  then you commonly enter the created tree of directories searching for
>>>>>>> a makefike. In this directory, you run:
>>>>>>>
>>>>>>> ./configure
>>>>>>> ./make install
>>>>>>>
>>>>>>> normally you have also an INSTALL and README files in the same
>>>>>>> directory.
>>>>>>>
>>>>>>> Finally you create some links and that's all. I don't now if this is
>>>>>>> your case, but is the common way to do those thinks
>>>>>>>
>>>>>>> 2014/1/31, p Valdés<[email protected]>:
>>>>>>>
>>>>>>>> tar.gz file is an archive (a box with many archives) + compressed
>>>>>>>> (gzip)
>>>>>>>> file
>>>>>>>>
>>>>>>>> you need first to uncompress the file with: gunzip myfile.tar.gz
>>>>>>>>
>>>>>>>> then you need to move to your choice directory and open the package
>>>>>>>> (now named myfile.tar) with
>>>>>>>>
>>>>>>>> tar -xvvf myfile.tar
>>>>>>>>
>>>>>>>> 2014/1/31, Peter<[email protected]>:
>>>>>>>>
>>>>>>>>> I have downloaded all the files shown in this page
>>>>>>>>>
>>>>>>>>> http://gmt.soest.hawaii.edu/projects/gmt/wiki/BuildingGMT
>>>>>>>>> http://gmt.soest.hawaii.edu/projects/gmt/wiki/PackagingGMT
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> Really didn't understand please someone help
>>>>>>>>>
>>>>>>>>> How to install ? I don't want mixup with system library I want to
>>>>>>>>> install
>>>>>>>>> here
>>>>>>>>>
>>>>>>>>> /home/peter/software/gmt/gmt5
>>>>>>>>>
>>>>>>>>> I have these files in home directory
>>>>>>>>>
>>>>>>>>> gmt-5.1.0-src.tar.gz
>>>>>>>>> gshhg-gmt-nc4-2.2.4.tar.gz
>>>>>>>>> dcw-gmt-1.1.0.tar.gz
>>>>>>>>>
>>>>>>>>> netcdf_home=/home/peter/software/netcdf/netcdf_4_3
>>>>>>>>> hdf_home=/home/peter/software/hdf/hdf5
>>>>>>>>> cmake_home=/home/peter/software/cmake/bin
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> Please someone kindly help me, I am not interested to use yum as it
>>>>>>>>> installs old version
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> - Peter
>>>>>>>>>
>>>>>>>>> To unsubscribe, send the message "signoff gmt-help" to
>>>>>>>>> [email protected]
>>>>>>>>>
>>>>>>>>>  To unsubscribe, send the message "signoff gmt-help" to
>>>>>>> [email protected]
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>> To unsubscribe, send the message "signoff gmt-help" to
>>>>>> [email protected]
>>>>>>
>>>>>
>>>>> To unsubscribe, send the message "signoff gmt-help" to
>>>>> [email protected]
>>>>>
>>>>
>>>> To unsubscribe, send the message "signoff gmt-help" to
>>>> [email protected]
>>>>
>>>
>>> To unsubscribe, send the message "signoff gmt-help" to
>>> [email protected]
>>>
>>
>> To unsubscribe, send the message "signoff gmt-help" to
>> [email protected]
>>
>
>

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