Re: gmt-5 Solaris acomp failed

Hallo Florian

cmake ..
-- The C compiler identification is GNU 4.8.2
-- The CXX compiler identification is GNU 4.8.2
-- Check for working C compiler: /opt/csw/bin/gcc
-- Check for working C compiler: /opt/csw/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /opt/csw/bin/c++
-- Check for working CXX compiler: /opt/csw/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Searching dependent libraries. This may take a few minutes...
-- Looking for nc_def_var_deflate
-- Looking for nc_def_var_deflate - found
-- Found NETCDF: /opt/csw/lib/libnetcdf.so
-- Found GDAL: /opt/csw/gxx/lib/libgdal.so
-- Found PCRE: /opt/csw/lib/libpcre.so
-- Could NOT find FFTW3 (missing:  FFTW3F_LIBRARY FFTW3F_VERSION_RECENT)


/opt/csw/lib>la *fftw*
lrwxrwxrwx   1 root     root          25 Mrz  6  2013 libfftw3_threads.so.3
-> libfftw3_threads.so.3.3.2
-rwxr-xr-x   1 root     bin          44K Jan  2  2013 libfftw3_threads.so.3.3.2
lrwxrwxrwx   1 root     root          17 Mrz  6  2013 libfftw3.so.3 ->
libfftw3.so.3.3.2
-rwxr-xr-x   1 root     bin         1,8M Jan  2  2013 libfftw3.so.3.3.2
lrwxrwxrwx   1 root     root          26 Mrz  6  2013 libfftw3l_threads.so.3
-> libfftw3l_threads.so.3.3.2
-rwxr-xr-x   1 root     bin          44K Jan  2  2013 libfftw3l_threads.so.3.3.2
lrwxrwxrwx   1 root     root          18 Mrz  6  2013 libfftw3l.so.3 ->
libfftw3l.so.3.3.2
-rwxr-xr-x   1 root     bin         1,7M Jan  2  2013 libfftw3l.so.3.3.2


-- Looking for dladdr - found
CMake Error at cmake/modules/ConfigureChecks.cmake:221 (check_symbol_exists):
  CHECK_SYMBOL_EXISTS Macro invoked with incorrect arguments for macro named:
  CHECK_SYMBOL_EXISTS
Call Stack (most recent call first):
  src/CMakeLists.txt:110 (include)


CMake Error at cmake/modules/ConfigureChecks.cmake:222 (check_symbol_exists):
  CHECK_SYMBOL_EXISTS Macro invoked with incorrect arguments for macro named:
  CHECK_SYMBOL_EXISTS
Call Stack (most recent call first):
  src/CMakeLists.txt:110 (include)


-- Performing Test memchrExists - Failed
-- ANSI C header files - not found

-- Found GSHHG: /opt/GMT-5.1.1/src/gshhg-gmt-2.3.0
-- Found DCW: /opt/GMT-5.1.1/src/dcw-gmt-1.1.1
-- Using CFLAGS = '-std=gnu99 -O3 -DNDEBUG'
-- Found Sphinx: /opt/csw/bin/sphinx-build
*  Options:
*  Found GSHHG database       : /opt/GMT-5.1.1/src/gshhg-gmt-2.3.0 (2.3.0)
*  Found DCW-GMT database     : /opt/GMT-5.1.1/src/dcw-gmt-1.1.1
*  NetCDF library             : /opt/csw/lib/libnetcdf.so
*  NetCDF include dir         : /opt/csw/include
*  GDAL library               : /opt/csw/gxx/lib/libgdal.so
*  GDAL include dir           : /opt/csw/gxx/include
*  FFTW library               : FFTW3F_LIBRARY-NOTFOUND
*  FFTW include dir           : /opt/csw/include
*  Accelerate Framework       :
*  Regex support              : PCRE (/opt/csw/lib/libpcre.so)
*  ZLIB library               : /usr/lib/libz.so
*  ZLIB include dir           : /usr/include
*  License restriction        : no
*  Triangulation method       : Shewchuk
*  Build mode                 : shared
*  Build GMT core             : always [libgmt.so]
*  Build PSL library          : always [libpsl.so]
*  Build GMT supplements      : yes [supplements.so]
*  Build proto supplements    : none
*
*  Locations:
*  Installing GMT in          : /opt/GMT-5.1.1
*  GMT_DATADIR                : /opt/GMT-5.1.1/share
*  GMT_DOCDIR                 : /opt/GMT-5.1.1/share/doc
*  GMT_MANDIR                 : /opt/GMT-5.1.1/share/man
-- Configuring incomplete, errors occurred!
See also "/opt/GMT-5.1.1/src/gmt-5.1.1/build/CMakeFiles/CMakeOutput.log".
See also "/opt/GMT-5.1.1/src/gmt-5.1.1/build/CMakeFiles/CMakeError.log".

Wolfgang

On Fri, 7 Mar 2014 01:35:07 +0100, Florian Wobbe <[email protected]> wrote:

>SunOS guys, there is no guarantee that the SunPro compiler will work. Gcc
should be fine though with -DNO_SIGHANDLER. Please change the following
lines in cmake/modules/ConfigureChecks.cmake and remove build/CMakeCache.txt:
>
>-	check_symbol_exists (memalign       malloc.h HAVE_MEMALIGN)
>-	check_symbol_exists (posix_memalign stdlib.h HAVE_POSIX_MEMALIGN)
>+	check_function_exists (memalign       HAVE_MEMALIGN)
>+	check_function_exists (posix_memalign HAVE_POSIX_MEMALIGN)
>
>Also make sure that all dependent libs are available as 64 bit version and
configure with
>
>set (CMAKE_C_FLAGS -m64)
>
>otherwise your users will have no fun at all. Use the -m64 compiler flag
with GMT 4, too.
>
>Cheers
>Florian
>
>To unsubscribe, send the message "signoff gmt-help" to
[email protected]

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