Re: HDF5 error with gmt 4.5.12

"J. Luis" <[email protected]> Sun, 17 Aug 2014 21:32:39 +0100
Newsgroups gmane.comp.gis.gmt.user
Message-ID <[email protected]>
This is a multi-part message in MIME format.
--------------030201020901060108000401
Content-Type: text/plain; charset=UTF-8; format=flowed
Content-Transfer-Encoding: quoted-printable

Ops, off course (vacations-memory-cleaning)
I had once that message that I obviously ignored ... and it crashed on=20
first access.

> Not entirely true: netCDF will likely use HDF, at least if you have=20
> netCDF4.
>
> But I suggest simply to do what is suggested in the warning message,=20
> which should be a WARNING not an ERROR:
>
> You can, at your own risk, disable this warning by setting the environm=
ent
>
> variable 'HDF5_DISABLE_VERSION_CHECK' to a value of '1'.
>
>
> HDF is way too fussy about this version check. Even for versions that=20
> SHOULD be compatible it balks on this error.
>
> Remko
>
> On 16 Aug 2014, at 12:18, Joaquim Luis <[email protected]=20
> <mailto:[email protected]>> wrote:
>
>> Well, it wasn't me who said that GMT complained about a HDF version=20
>> mismatch, and GMT doesn't access HDF directly. Only via GDAL.
>>
>> Sent from my iDedo
>>
>> No dia 16/08/2014, =C3=A0s 10:51, "Gery ." <[email protected]=20
>> <mailto:[email protected]>> escreveu:
>>
>>> So, that HDF thing is only to use gdal?? great! because I don't link=20
>>> gdal with GMT, so you are wrong Joaquim!! =3D) Cygwin sucks perhaps=20
>>> for you, for me it works well. Based on that, why it sucks? why are=20
>>> you guys so angry with Cygwin? I think you just need to relief that=20
>>> feeling and be free! ;)
>>>
>>> Cheers, and be happy!
>>>
>>> Sent from my iRon
>>>
>>> On Aug 16, 2014, at 1:40, "Joaquim Luis" <[email protected]=20
>>> <mailto:[email protected]>> wrote:
>>>
>>> Gery,
>>>
>>> That warning from HDF essentially means that you are screwed. The=20
>>> computer will blow, or at least you'll get a crash. The HDF version=20
>>> used to link GDAL and the one at use must be exactly the same.
>>> Still, on the land of opinions, Cygwin sucks compared with with=20
>>> MinGW where you can just use the, way faster, GMT5 Win binaries=20
>>> provided by us.
>>>
>>> Sent from my iPadiola
>>>
>>> On 15/08/2014, at 12:57, "Gery ." <[email protected]=20
>>> <mailto:[email protected]>> wrote:
>>>
>>>> Sorry for the last noisy message, but things were smooth finally,=20
>>>> the solution was to install without gdal. Now things work, but I=20
>>>> received this message about HDF5:
>>>>
>>>> ----------------------------------------------------------- =E2=80=8B
>>>>
>>>> $ pscoast -R-71.2/-70.9/42.25/42.45 -JM6.0 -Ba0.05f0.01SWen -Ia -Na=20
>>>> -W3 -K > ps
>>>>
>>>> Warning! ***HDF5 library version mismatched error***
>>>>
>>>> The HDF5 header files used to compile this application do not match
>>>>
>>>> the version used by the HDF5 library to which this application is=20
>>>> linked.
>>>>
>>>> Data corruption or segmentation faults may occur if the application=20
>>>> continues.
>>>>
>>>> This can happen when an application was compiled by one version of=20
>>>> HDF5 but
>>>>
>>>> linked with a different version of static or shared HDF5 library.
>>>>
>>>> You should recompile the application or check your shared library=20
>>>> related
>>>>
>>>> settings such as 'LD_LIBRARY_PATH'.
>>>>
>>>> You can, at your own risk, disable this warning by setting the=20
>>>> environment
>>>>
>>>> variable 'HDF5_DISABLE_VERSION_CHECK' to a value of '1'.
>>>>
>>>> Setting it to 2 or higher will suppress the warning messages totally=
.
>>>>
>>>> Headers are 1.8.12, library is 1.8.13
>>>>
>>>> SUMMARY OF THE HDF5 CONFIGURATION
>>>>
>>>> =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
>>>>
>>>> General Information:
>>>>
>>>> -------------------
>>>>
>>>> HDF5 Version: 1.8.13
>>>>
>>>> Configured on: Wed Jun 4 15:04:57 CEST 2014
>>>>
>>>> Configured by: marco@GE-MATZERI-EU
>>>>
>>>> Configure mode: production
>>>>
>>>> Host system: i686-pc-cygwin
>>>>
>>>> Uname information: CYGWIN_NT-6.1-WOW64 GE-MATZERI-EU=20
>>>> 1.7.30(0.272/5/3) 2014-05-23 10:36 i686 Cygwin
>>>>
>>>> Byte sex: little-endian
>>>>
>>>> Libraries: shared
>>>>
>>>> Installation point: /usr
>>>>
>>>> Compiling Options:
>>>>
>>>> ------------------
>>>>
>>>> Compilation Mode: production
>>>>
>>>> C Compiler: /usr/bin/gcc
>>>>
>>>> CFLAGS: -ggdb -O2 -pipe -Wimplicit-function-declaration=20
>>>> -fdebug-prefix-map=3D/pub/devel/hdf5/hdf5-1.8.13-1/=20
>>>> build=3D/usr/src/debug/hdf5-1.8.13-1=20
>>>> -fdebug-prefix-map=3D/pub/devel/hdf5/hdf5-1.8.13-1/src/hdf5-1.8.13=3D=
/usr/src/debug/hdf5-1.8.13-1
>>>>
>>>> H5_CFLAGS: -std=3Dc99 -pedantic -Wall -Wextra -Wundef -Wshadow=20
>>>> -Wpointer-arith -Wbad-function-cast -Wcast-qual -Wcast-align=20
>>>> -Wwrite-strings -Wconversion -Waggregate-return -Wstrict-prototypes=20
>>>> -Wmissing-prototypes -Wmissing-declarations -Wre dundant-decls=20
>>>> -Wnested-externs -Winline -Wfloat-equal -Wmissing-format-attribute=20
>>>> -Wmissing-noreturn -Wpacked -Wdisabled-optimizati on -Wformat=3D2=20
>>>> -Wunreachable-code -Wendif-labels -Wdeclaration-after-statement=20
>>>> -Wold-style-definition -Winvalid-pch -Wvariadic-macr os -Winit-self=20
>>>> -Wmissing-include-dirs -Wswitch-default -Wswitch-enum=20
>>>> -Wunused-macros -Wunsafe-loop-optimizations -Wc++-compat -Wst=20
>>>> rict-overflow -Wlogical-op -Wlarger-than=3D2048 -Wvla -Wsync-nand=20
>>>> -Wframe-larger-than=3D16384 -Wpacked-bitfield-compat -Wstrict-overfl=
=20
>>>> ow=3D5 -Wjump-misses-init -Wunsuffixed-float-constants=20
>>>> -Wdouble-promotion -Wsuggest-attribute=3Dconst -Wtrampolines=20
>>>> -Wstack-usage=3D8192 -Wvector-operation-performance=20
>>>> -Wsuggest-attribute=3Dpure -Wsuggest-attribute=3Dnoreturn=20
>>>> -Wsuggest-attribute=3Dformat -O3 -fomit-frame- pointer -finline-func=
tions
>>>>
>>>> AM_CFLAGS:
>>>>
>>>> CPPFLAGS:
>>>>
>>>> H5_CPPFLAGS: -DNDEBUG -UH5_DEBUG_API
>>>>
>>>> AM_CPPFLAGS:
>>>>
>>>> Shared C Library: yes
>>>>
>>>> Static C Library: no
>>>>
>>>> Statically Linked Executables: no
>>>>
>>>> LDFLAGS:
>>>>
>>>> H5_LDFLAGS: -no-undefined
>>>>
>>>> AM_LDFLAGS:
>>>>
>>>> Extra libraries: -lz -ldl -lm
>>>>
>>>> Archiver: ar
>>>>
>>>> Ranlib: ranlib
>>>>
>>>> Debugged Packages:
>>>>
>>>> API Tracing: no
>>>>
>>>> Languages:
>>>>
>>>> ----------
>>>>
>>>> Fortran: no
>>>>
>>>> C++: yes
>>>>
>>>> C++ Compiler: /usr/bin/g++
>>>>
>>>> C++ Flags: -ggdb -O2 -pipe=20
>>>> -fdebug-prefix-map=3D/pub/devel/hdf5/hdf5-1.8.13-1/build=3D/usr/src/=
debug/hdf5-1.8.13=20
>>>> -1=20
>>>> -fdebug-prefix-map=3D/pub/devel/hdf5/hdf5-1.8.13-1/src/hdf5-1.8.13=3D=
/usr/src/debug/hdf5-1.8.13-1
>>>>
>>>> H5 C++ Flags:
>>>>
>>>> AM C++ Flags:
>>>>
>>>> Shared C++ Library: yes
>>>>
>>>> Static C++ Library: no
>>>>
>>>> Features:
>>>>
>>>> ---------
>>>>
>>>> Parallel HDF5: no
>>>>
>>>> High Level library: yes
>>>>
>>>> Threadsafety: no
>>>>
>>>> Default API Mapping: v18
>>>>
>>>> With Deprecated Public Symbols: yes
>>>>
>>>> I/O filters (external): deflate(zlib)
>>>>
>>>> I/O filters (internal): shuffle,fletcher32,nbit,scaleoffset
>>>>
>>>> MPE: no
>>>>
>>>> Direct VFD: yes
>>>>
>>>> dmalloc: no
>>>>
>>>> Clear file buffers before write: yes
>>>>
>>>> Using memory checker: no
>>>>
>>>> Function Stack Tracing: no
>>>>
>>>> Strict File Format Checks: no
>>>>
>>>> Optimization Instrumentation: no
>>>>
>>>> Large File Support (LFS): yes
>>>>
>>>> Bye...
>>>>
>>>> Aborted (core dumped)
>>>>
>>>> -----------------------------------------------------------
>>>>
>>>> I have the latest Cygwin 32-bit version. Which HDF5 version should=20
>>>> I use? this Cygwin comes with hdf5 1.8.13-1, netcdf 4.3.2-1=20
>>>> and zlib 1.2.8-1.
>>>>
>>>> Any ideas?? thank..
>>>>
>>>> Gery
>>>>
>>>> Mailing list for GMT discussions of all kinds. If you are not sure=20
>>>> you have found a bug, discuss it here first. To formally report=20
>>>> bugs or request features, please register and add New Issue=20
>>>> ongmt.soest.hawaii.edu <http://gmt.soest.hawaii.edu/>To=20
>>>> unsubscribe, send the message "signoff gmt-help"=20
>>>> [email protected] <mailto:[email protected]>Note:=20
>>>> gmt-help will become obsolete on Sept 1, 2014 - please use forum=20
>>>> ongmt.soest.hawaii.edu <http://gmt.soest.hawaii.edu/>instead.
>>> Mailing list for GMT discussions of all kinds. If you are not sure=20
>>> you have found a bug, discuss it here first. To formally report bugs=20
>>> or request features, please register and add New Issue=20
>>> ongmt.soest.hawaii.edu <http://gmt.soest.hawaii.edu/>To unsubscribe,=20
>>> send the message "signoff gmt-help" [email protected]=20
>>> <mailto:[email protected]>Note: gmt-help will become=20
>>> obsolete on Sept 1, 2014 - please use forum ongmt.soest.hawaii.edu=20
>>> <http://gmt.soest.hawaii.edu/>instead.
>>> Mailing list for GMT discussions of all kinds. If you are not sure=20
>>> you have found a bug, discuss it here first. To formally report bugs=20
>>> or request features, please register and add New Issue=20
>>> ongmt.soest.hawaii.edu <http://gmt.soest.hawaii.edu/>To unsubscribe,=20
>>> send the message "signoff gmt-help" [email protected]=20
>>> <mailto:[email protected]>Note: gmt-help will become=20
>>> obsolete on Sept 1, 2014 - please use forum ongmt.soest.hawaii.edu=20
>>> <http://gmt.soest.hawaii.edu/>instead.
>> Mailing list for GMT discussions of all kinds. If you are not sure=20
>> you have found a bug, discuss it here first. To formally report bugs=20
>> or request features, please register and add New Issue=20
>> ongmt.soest.hawaii.edu <http://gmt.soest.hawaii.edu/>To unsubscribe,=20
>> send the message "signoff gmt-help" [email protected]=20
>> <mailto:[email protected]>Note: gmt-help will become obsolete=20
>> on Sept 1, 2014 - please use forum ongmt.soest.hawaii.edu=20
>> <http://gmt.soest.hawaii.edu/>instead.
>
> Mailing list for GMT discussions of all kinds. If you are not sure you=20
> have found a bug, discuss it here first. To formally report bugs or=20
> request features, please register and add New Issue on=20
> gmt.soest.hawaii.edu To unsubscribe, send the message "signoff=20
> gmt-help" to [email protected]=20
> <mailto:[email protected]> Note: gmt-help will become obsolete=20
> on Sept 1, 2014 - please use forum on gmt.soest.hawaii.edu instead.=20


Mailing list for GMT discussions of all kinds.  If you are not sure you h=
ave found a bug, discuss it here first.
To formally report bugs or request features, please register and add New =
Issue on gmt.soest.hawaii.edu
To unsubscribe, send the message "signoff gmt-help" to [email protected]=
aii.edu
Note: gmt-help will become obsolete on Sept 1, 2014 - please use forum on=
 gmt.soest.hawaii.edu instead.

--------------030201020901060108000401
Content-Type: text/html; charset=UTF-8
Content-Transfer-Encoding: quoted-printable

<html>
  <head>
    <meta content=3D"text/html; charset=3DUTF-8" http-equiv=3D"Content-Ty=
pe">
  </head>
  <body bgcolor=3D"#FFFFFF" text=3D"#000000">
    Ops, off course (vacations-memory-cleaning)<br>
    I had once that message that I obviously ignored ... and it crashed
    on first access.<br>
    <br>
    <blockquote cite=3D"mid:[email protected]"
      type=3D"cite">
      <meta http-equiv=3D"Content-Type" content=3D"text/html; charset=3DU=
TF-8">
      <div>Not entirely true: netCDF will likely use HDF, at least if
        you have netCDF4.</div>
      <div><br>
      </div>
      <div>But I suggest simply to do what is suggested in the warning
        message, which should be a WARNING not an ERROR:</div>
      <div><br>
      </div>
      <div>
        <p style=3D"font-family: Calibri, 'Segoe UI', Meiryo, 'Microsoft
          YaHei UI', 'Microsoft JhengHei UI', 'Malgun Gothic',
          sans-serif; font-size: 16px;">You can, at your own risk,
          disable this warning by setting the environment</p>
        <p style=3D"font-family: Calibri, 'Segoe UI', Meiryo, 'Microsoft
          YaHei UI', 'Microsoft JhengHei UI', 'Malgun Gothic',
          sans-serif; font-size: 16px;">variable
          'HDF5_DISABLE_VERSION_CHECK' to a value of '1'.</p>
        <div><br>
        </div>
      </div>
      <div>HDF is way too fussy about this version check. Even for
        versions that SHOULD be compatible it balks on this error.</div>
      <div><br>
      </div>
      <div>Remko</div>
      <br>
      <div>
        <div>On 16 Aug 2014, at 12:18, Joaquim Luis &lt;<a
            moz-do-not-send=3D"true" href=3D"mailto:[email protected]">jm=
[email protected]</a>&gt;
          wrote:</div>
        <br class=3D"Apple-interchange-newline">
        <blockquote type=3D"cite">
          <div dir=3D"auto" style=3D"font-family: Monaco; font-size: 12px=
;
            font-style: normal; font-variant: normal; font-weight:
            normal; letter-spacing: normal; line-height: normal;
            orphans: auto; text-align: start; text-indent: 0px;
            text-transform: none; white-space: normal; widows: auto;
            word-spacing: 0px; -webkit-text-stroke-width: 0px;">
            <div>Well, it wasn't me who said that GMT complained about a
              HDF version mismatch, and GMT doesn't access HDF directly.
              Only via GDAL.=C2=A0<br>
              <br>
              <div>Sent from my iDedo</div>
            </div>
            <div><br>
              No dia 16/08/2014, =C3=A0s 10:51, "Gery ." &lt;<a
                moz-do-not-send=3D"true"
                href=3D"mailto:[email protected]">[email protected]=
OM</a>&gt;
              escreveu:<br>
              <br>
            </div>
            <blockquote type=3D"cite">
              <div>So, that HDF thing is only to use gdal?? great!
                because I don't link gdal with GMT, so you are wrong
                Joaquim!! =3D) Cygwin sucks perhaps for you, for me it
                works well. Based on that, why it sucks? why are you
                guys so angry with Cygwin? I think you just need to
                relief that feeling and be free! ;)</div>
              <div><br>
              </div>
              <div>Cheers, and be happy!<br>
                <br>
                Sent from my iRon</div>
              <div><br>
                On Aug 16, 2014, at 1:40, "Joaquim Luis" &lt;<a
                  moz-do-not-send=3D"true" href=3D"mailto:[email protected]=
OM">[email protected]</a>&gt;
                wrote:<br>
                <br>
              </div>
              <div>
                <div>Gery,</div>
                <div><br>
                </div>
                <div>That warning from HDF essentially means that you
                  are screwed. The computer will blow, or at least
                  you'll get a crash. The HDF version used to link GDAL
                  and the one at use must be exactly the same.</div>
                <div>Still, on the land of opinions, Cygwin sucks
                  compared with with MinGW where you can just use the,
                  way faster, GMT5 Win binaries provided by us.=C2=A0<br>
                  <br>
                  Sent from my iPadiola</div>
                <div><br>
                  On 15/08/2014, at 12:57, "Gery ." &lt;<a
                    moz-do-not-send=3D"true"
                    href=3D"mailto:[email protected]">gamejihou@HOTMA=
IL.COM</a>&gt;
                  wrote:<br>
                  <br>
                </div>
                <blockquote type=3D"cite">
                  <div data-externalstyle=3D"false" dir=3D"ltr"
                    style=3D"font-family: Calibri, 'Segoe UI', Meiryo,
                    'Microsoft YaHei UI', 'Microsoft JhengHei UI',
                    'Malgun Gothic', sans-serif; font-size: 12pt;">
                    <div>Sorry for the last noisy message, but things
                      were smooth finally, the solution was to install
                      without gdal. Now things work, but I received this
                      message about HDF5:</div>
                    <div><br>
                    </div>
                    <div>------------------------------------------------=
-----------
                      =E2=80=8B</div>
                    <div>
                      <p>$ pscoast -R-71.2/-70.9/42.25/42.45 -JM6.0
                        -Ba0.05f0.01SWen -Ia -Na -W3 -K &gt; ps</p>
                      <p>Warning! ***HDF5 library version mismatched
                        error***</p>
                    </div>
                    <div>
                      <p>The HDF5 header files used to compile this
                        application do not match</p>
                      <p>the version used by the HDF5 library to which
                        this application is linked.</p>
                      <p>Data corruption or segmentation faults may
                        occur if the application continues.</p>
                      <p>This can happen when an application was
                        compiled by one version of HDF5 but</p>
                      <p>linked with a different version of static or
                        shared HDF5 library.</p>
                      <p>You should recompile the application or check
                        your shared library related</p>
                      <p>settings such as 'LD_LIBRARY_PATH'.</p>
                      <p>You can, at your own risk, disable this warning
                        by setting the environment</p>
                      <p>variable 'HDF5_DISABLE_VERSION_CHECK' to a
                        value of '1'.</p>
                      <p>Setting it to 2 or higher will suppress the
                        warning messages totally.</p>
                      <p>Headers are 1.8.12, library is 1.8.13</p>
                      <p>SUMMARY OF THE HDF5 CONFIGURATION</p>
                      <p>=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D</p>
                      <p>General Information:</p>
                      <p>-------------------</p>
                      <p>HDF5 Version: 1.8.13</p>
                      <p>Configured on: Wed Jun 4 15:04:57 CEST 2014</p>
                      <p>Configured by: marco@GE-MATZERI-EU</p>
                      <p>Configure mode: production</p>
                      <p>Host system: i686-pc-cygwin</p>
                      <p>Uname information: CYGWIN_NT-6.1-WOW64
                        GE-MATZERI-EU 1.7.30(0.272/5/3) 2014-05-23 10:36
                        i686 Cygwin</p>
                      <p>Byte sex: little-endian</p>
                      <p>Libraries: shared</p>
                      <p>Installation point: /usr</p>
                      <p>Compiling Options:</p>
                      <p>------------------</p>
                      <p>Compilation Mode: production</p>
                      <p>C Compiler: /usr/bin/gcc</p>
                      <p>CFLAGS: -ggdb -O2 -pipe
                        -Wimplicit-function-declaration
                        -fdebug-prefix-map=3D/pub/devel/hdf5/hdf5-1.8.13-=
1/
                        build=3D/usr/src/debug/hdf5-1.8.13-1
-fdebug-prefix-map=3D/pub/devel/hdf5/hdf5-1.8.13-1/src/hdf5-1.8.13=3D/usr=
/src/debug/hdf5-1.8.13-1</p>
                      <p>H5_CFLAGS: -std=3Dc99 -pedantic -Wall -Wextra
                        -Wundef -Wshadow -Wpointer-arith
                        -Wbad-function-cast -Wcast-qual -Wcast-align
                        -Wwrite-strings -Wconversion -Waggregate-return
                        -Wstrict-prototypes -Wmissing-prototypes
                        -Wmissing-declarations -Wre dundant-decls
                        -Wnested-externs -Winline -Wfloat-equal
                        -Wmissing-format-attribute -Wmissing-noreturn
                        -Wpacked -Wdisabled-optimizati on -Wformat=3D2
                        -Wunreachable-code -Wendif-labels
                        -Wdeclaration-after-statement
                        -Wold-style-definition -Winvalid-pch
                        -Wvariadic-macr os -Winit-self
                        -Wmissing-include-dirs -Wswitch-default
                        -Wswitch-enum -Wunused-macros
                        -Wunsafe-loop-optimizations -Wc++-compat -Wst
                        rict-overflow -Wlogical-op -Wlarger-than=3D2048
                        -Wvla -Wsync-nand -Wframe-larger-than=3D16384
                        -Wpacked-bitfield-compat -Wstrict-overfl ow=3D5
                        -Wjump-misses-init -Wunsuffixed-float-constants
                        -Wdouble-promotion -Wsuggest-attribute=3Dconst
                        -Wtrampolines -Wstack-usage=3D8192
                        -Wvector-operation-performance
                        -Wsuggest-attribute=3Dpure
                        -Wsuggest-attribute=3Dnoreturn
                        -Wsuggest-attribute=3Dformat -O3 -fomit-frame-
                        pointer -finline-functions</p>
                      <p>AM_CFLAGS:</p>
                      <p>CPPFLAGS:</p>
                      <p>H5_CPPFLAGS: -DNDEBUG -UH5_DEBUG_API</p>
                      <p>AM_CPPFLAGS:</p>
                      <p>Shared C Library: yes</p>
                      <p>Static C Library: no</p>
                      <p>Statically Linked Executables: no</p>
                      <p>LDFLAGS:</p>
                      <p>H5_LDFLAGS: -no-undefined</p>
                      <p>AM_LDFLAGS:</p>
                      <p>Extra libraries: -lz -ldl -lm</p>
                      <p>Archiver: ar</p>
                      <p>Ranlib: ranlib</p>
                      <p>Debugged Packages:</p>
                      <p>API Tracing: no</p>
                      <p>Languages:</p>
                      <p>----------</p>
                      <p>Fortran: no</p>
                      <p>C++: yes</p>
                      <p>C++ Compiler: /usr/bin/g++</p>
                      <p>C++ Flags: -ggdb -O2 -pipe
                        -fdebug-prefix-map=3D/pub/devel/hdf5/hdf5-1.8.13-=
1/build=3D/usr/src/debug/hdf5-1.8.13
                        -1
-fdebug-prefix-map=3D/pub/devel/hdf5/hdf5-1.8.13-1/src/hdf5-1.8.13=3D/usr=
/src/debug/hdf5-1.8.13-1</p>
                      <p>H5 C++ Flags:</p>
                      <p>AM C++ Flags:</p>
                      <p>Shared C++ Library: yes</p>
                      <p>Static C++ Library: no</p>
                      <p>Features:</p>
                      <p>---------</p>
                      <p>Parallel HDF5: no</p>
                      <p>High Level library: yes</p>
                      <p>Threadsafety: no</p>
                      <p>Default API Mapping: v18</p>
                      <p>With Deprecated Public Symbols: yes</p>
                      <p>I/O filters (external): deflate(zlib)</p>
                      <p>I/O filters (internal):
                        shuffle,fletcher32,nbit,scaleoffset</p>
                      <p>MPE: no</p>
                      <p>Direct VFD: yes</p>
                      <p>dmalloc: no</p>
                      <p>Clear file buffers before write: yes</p>
                      <p>Using memory checker: no</p>
                      <p>Function Stack Tracing: no</p>
                      <p>Strict File Format Checks: no</p>
                      <p>Optimization Instrumentation: no</p>
                      <p>Large File Support (LFS): yes</p>
                      <p>Bye...</p>
                      <p>Aborted (core dumped)</p>
                      <p>------------------------------------------------=
-----------</p>
                    </div>
                    <div>I have the latest Cygwin 32-bit version. Which
                      HDF5 version should I use? this Cygwin comes with
                      hdf5 1.8.13-1, netcdf 4.3.2-1 and=C2=A0zlib 1.2.8-1=
.</div>
                    <div><br>
                    </div>
                    <div>Any ideas?? thank..</div>
                    <div><br>
                    </div>
                    <div>Gery</div>
                    <div><br>
                    </div>
                  </div>
                  Mailing list for GMT discussions of all kinds. If you
                  are not sure you have found a bug, discuss it here
                  first. To formally report bugs or request features,
                  please register and add New Issue on<a
                    moz-do-not-send=3D"true"
                    href=3D"http://gmt.soest.hawaii.edu/">gmt.soest.hawai=
i.edu</a><span
                    class=3D"Apple-converted-space">=C2=A0</span>To
                  unsubscribe, send the message "signoff gmt-help" to<a
                    moz-do-not-send=3D"true"
                    href=3D"mailto:[email protected]">listserv@li=
sts.hawaii.edu</a><span
                    class=3D"Apple-converted-space">=C2=A0</span>Note: gm=
t-help
                  will become obsolete on Sept 1, 2014 - please use
                  forum on<span class=3D"Apple-converted-space">=C2=A0</s=
pan><a
                    moz-do-not-send=3D"true"
                    href=3D"http://gmt.soest.hawaii.edu/">gmt.soest.hawai=
i.edu</a><span
                    class=3D"Apple-converted-space">=C2=A0</span>instead.=
</blockquote>
                Mailing list for GMT discussions of all kinds. If you
                are not sure you have found a bug, discuss it here
                first. To formally report bugs or request features,
                please register and add New Issue on<a
                  moz-do-not-send=3D"true"
                  href=3D"http://gmt.soest.hawaii.edu/">gmt.soest.hawaii.=
edu</a><span
                  class=3D"Apple-converted-space">=C2=A0</span>To unsubsc=
ribe,
                send the message "signoff gmt-help" to<a
                  moz-do-not-send=3D"true"
                  href=3D"mailto:[email protected]">listserv@list=
s.hawaii.edu</a><span
                  class=3D"Apple-converted-space">=C2=A0</span>Note: gmt-=
help
                will become obsolete on Sept 1, 2014 - please use forum
                on<a moz-do-not-send=3D"true"
                  href=3D"http://gmt.soest.hawaii.edu/">gmt.soest.hawaii.=
edu</a><span
                  class=3D"Apple-converted-space">=C2=A0</span>instead.</=
div>
              Mailing list for GMT discussions of all kinds. If you are
              not sure you have found a bug, discuss it here first. To
              formally report bugs or request features, please register
              and add New Issue on<a moz-do-not-send=3D"true"
                href=3D"http://gmt.soest.hawaii.edu/">gmt.soest.hawaii.ed=
u</a><span
                class=3D"Apple-converted-space">=C2=A0</span>To unsubscri=
be,
              send the message "signoff gmt-help" to<a
                moz-do-not-send=3D"true"
                href=3D"mailto:[email protected]">listserv@lists.=
hawaii.edu</a><span
                class=3D"Apple-converted-space">=C2=A0</span>Note: gmt-he=
lp
              will become obsolete on Sept 1, 2014 - please use forum on<=
a
                moz-do-not-send=3D"true"
                href=3D"http://gmt.soest.hawaii.edu/">gmt.soest.hawaii.ed=
u</a><span
                class=3D"Apple-converted-space">=C2=A0</span>instead.</bl=
ockquote>
            Mailing list for GMT discussions of all kinds. If you are
            not sure you have found a bug, discuss it here first. To
            formally report bugs or request features, please register
            and add New Issue on<a moz-do-not-send=3D"true"
              href=3D"http://gmt.soest.hawaii.edu/">gmt.soest.hawaii.edu<=
/a><span
              class=3D"Apple-converted-space">=C2=A0</span>To unsubscribe=
, send
            the message "signoff gmt-help" to<a moz-do-not-send=3D"true"
              href=3D"mailto:[email protected]">[email protected]=
waii.edu</a><span
              class=3D"Apple-converted-space">=C2=A0</span>Note: gmt-help=
 will
            become obsolete on Sept 1, 2014 - please use forum on<a
              moz-do-not-send=3D"true" href=3D"http://gmt.soest.hawaii.ed=
u/">gmt.soest.hawaii.edu</a><span
              class=3D"Apple-converted-space">=C2=A0</span>instead.</div>
        </blockquote>
      </div>
      <br>
      Mailing list for GMT discussions of all kinds. If you are not sure
      you have found a bug, discuss it here first.
      To formally report bugs or request features, please register and
      add New Issue on gmt.soest.hawaii.edu
      To unsubscribe, send the message "signoff gmt-help" to <a
        moz-do-not-send=3D"true" href=3D"mailto:[email protected]=
">[email protected]</a>
      Note: gmt-help will become obsolete on Sept 1, 2014 - please use
      forum on gmt.soest.hawaii.edu instead.
    </blockquote>
    <br>
  </body>
</html>
Mailing list for GMT discussions of all kinds.  If you are not sure you h=
ave found a bug, discuss it here first.
To formally report bugs or request features, please register and add New =
Issue on gmt.soest.hawaii.edu
To unsubscribe, send the message &quot;signoff gmt-help&quot; to <a href=3D=
"mailto:[email protected]">[email protected]</a>
Note: gmt-help will become obsolete on Sept 1, 2014 - please use forum on=
 gmt.soest.hawaii.edu instead.

--------------030201020901060108000401--