Properties file name collision?

I am using Eclipse checkstyle plugin on a project that has the following
.properties files:

myapp.app.properties
myapp.properties

The files havae name:value pairs in them i.e.

file1 has
appname:name
appId:id

file2 has:
userName:userName

When I tried to build  my project I got a warning about not been able to
find userName in file 1 and not being able to find appName for file 2.

The Checkstyle has java and property file selected as the types to check.
Could anyone tell me what is going on?
Thanks,    G

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