Re: Global alignment problem (bug?) in NeedlemanWunsch
Andreas Dräger <[email protected]>
| Newsgroups | gmane.comp.java.bio.general |
|---|---|
| Message-ID | <[email protected]> |
Hi all, By the way, I would like to mention that the bug has been fixed. It was a problem with the way how the alignment was presented to the user afterwards, i.e., a problem of the formatting algorithm. The alignment itself was correct and also when obtaining the GappedSequences after the alignment, these were correct. The problem was that the formatter was started with the original lenght of the sequences, which is usually to short after inserting gaps. This is now solved and the alignment should work fine now. Cheers Andreas -- Dipl.-Bioinform. Andreas Dräger Eberhard Karls University Tübingen Center for Bioinformatics (ZBIT) Sand 1 72076 Tübingen Germany Phone: +49-7071-29-70436 Fax: +49-7071-29-5091 _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l