AtomCache: auto-fetch and chemcompinfo
Daniel Asarnow <[email protected]>
| Newsgroups | gmane.comp.java.bio.general |
|---|---|
| Message-ID | <[email protected]> |
Hello again...I have a question about the AtomCache; currently with AutoFetch and LoadChemCompInfo both set false the AtomCache downloads ligand CIF files from rcsb.org/pdb/files/ligand and produces a lot of errors like "Trying to set field pdbx_synonyms in org.biojava.bio.structure.io.mmcif.model.ChemComp, but not found! (value:GLYCERIN; PROPANE-1,2,3-TRIOL')" Is this expected behavior given with those settings? Also, while not related to BioJava, I wonder if anyone knows why the wwpdb.org FTP archive doesn't contain the ligand files? Thanks, da P.S. Using binary JARs for alpha-5-snapshot. _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l