Re: equality of proteins based on their aminoacid sequence signature
Andy Yates <[email protected]>
| Newsgroups | gmane.comp.java.bio.general |
|---|---|
| Message-ID | <[email protected]> |
Hi Francois, Neither Compounds nor Sequences have an over-ridden equals() & hashcode() method which is why you're seeing the current behaviour. Andy On 9 Mar 2011, at 20:12, François Le Fevre wrote: > Dear all, > > I would like to know if 2 proteins that have the same sequence of aminoacid should be equals? > I was wandering that 2 Sequence<AminoAcidCompound> that have exactly the same string signature should be the same. > But it seems to be not the case. > Is it normal? > > Thank for your help. > > > Sequence<AminoAcidCompound> protein1 = MKRISTTITTTITITTGNGAG hash=801818331 > Sequence<AminoAcidCompound> protein2 = MKRISTTITTTITITTGNGAG hash=700804192 > > protein1.equals(protein2) return false. > > Francois > > -- > ---------------------- > Francois LE FEVRE > > _______________________________________________ > Biojava-l mailing list - [email protected] > http://lists.open-bio.org/mailman/listinfo/biojava-l -- Andrew Yates Ensembl Genomes Engineer EMBL-EBI Tel: +44-(0)1223-492538 Wellcome Trust Genome Campus Fax: +44-(0)1223-494468 Cambridge CB10 1SD, UK http://www.ensemblgenomes.org/ _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l