Re: Bio Java API - Amino Acids Data
Andy Yates <[email protected]>
| Newsgroups | gmane.comp.java.bio.general |
|---|---|
| Message-ID | <[email protected]> |
Hi Omer, If you are using BioJava3 then weight is available from the AminoAcidCompound object when taken from an AminoAcidCompoundSet. The other data points are not available from within BioJava. I know Andreas mentioned ages ago linking into one of the compound databases e.g. ChEBI but I don't think that's been done. Regards, Andy On 21 Apr 2011, at 07:44, omer f wrote: > Hi All, > > I Applied to the "Amino Acid" Project, > I found in the Bio Java API there is Amino Acids Objects, > But what i couldn't find - where there is Data (weight,Charge...) about each > Amino Acid, > My question, is there basic Data base for Amino Acids or we should get it > from user input, > > Thank you, > Omer. > _______________________________________________ > Biojava-l mailing list - [email protected] > http://lists.open-bio.org/mailman/listinfo/biojava-l -- Andrew Yates Ensembl Genomes Engineer EMBL-EBI Tel: +44-(0)1223-492538 Wellcome Trust Genome Campus Fax: +44-(0)1223-494468 Cambridge CB10 1SD, UK http://www.ensemblgenomes.org/ _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l