Re: Biojava implementation of CE algorithm
Daniel Asarnow <[email protected]>
| Newsgroups | gmane.comp.java.bio.general |
|---|---|
| Message-ID | <[email protected]> |
The two distributions available on the CE homepage are the "Linux" version I used above, apparently from 2001, and a tarball from 2004 containing a SPARC32/Solaris binary. But I think they are all (including Biojava) giving approximately the same results? -da On Sun, Jun 19, 2011 at 19:13, Andreas Prlic <[email protected]> wrote: >> and from the original C version: >> Structure Alignment Calculator, version 1.02, last modified: Jun 15, 2001. > >> The web version of CE is the same except for 1 fewer equivalent >> residues (CPU/FPU differences?) > > There are different versions of CE out there that have been developed > over time. I believe the BioJava code is based on the version from > 2003 or 2004 (CE version 2.3). > > Andreas > _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l