Re: atomcache with a file
Andreas Prlic <[email protected]>
| Newsgroups | gmane.comp.java.bio.general |
|---|---|
| Message-ID | <CALthepxgn5EQOemyuHcdwLrbM1Tryyn5xX4htjmX1yC1VFJ3JA@mail.gmail.com> |
Hi Jay,
you can use it like this:
// by default PDB files will be stored in a temporary directory
// there are two ways of configuring a directory, that can get
re-used multiple times:
// A) set the environment variable PDB_DIR
// B) call cache.setPath(path)
AtomCache cache = new AtomCache();
try {
// alternative: try d4hhba_ 4hhb.A 4hhb.A:1-100
Structure s = cache.getStructure("4hhb");
System.out.println(s);
} catch (Exception e) {
e.printStackTrace();
}
Hope that helps,
Andreas
On Thu, Sep 15, 2011 at 8:32 PM, Jay Vyas <[email protected]> wrote:
> Hi guys : Anyone want to share a code snippet to use AtomCache to load a PDB
> File from disk ?
>
> --
> Jay Vyas
> MMSB/UCHC
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