Re: Status of org.biojava3.data.sequence.SequenceUtil ?
Peter Troshin <[email protected]>
| Newsgroups | gmane.comp.java.bio.general |
|---|---|
| Message-ID | <[email protected]> |
Hi Jon, This class is a part of protein disorder prediction JAR and a recent addition to BioJava. You are welcome to use if it suits your needs. Bear in mid though that the FASTA file reader from this class reads the content of the whole FASTA file at once, i.e. if you are working with large FASTA files you will want to use something else instead. I've got a Stream based FASTA reader if you need one and if there is not one in BioJava already. I would imagine the functionality from this class is not going to disappear overnight, but it may and perhaps should be merged with other FASTA parsers in BioJava once somebody have time to do this. Regards, Peter On 19/10/2011 12:15, [email protected] wrote: > Hello, > > I can't find a jar containing org.biojava3.data.sequence.SequenceUtil, > even though it appears in the JavaDocs: > http://www.biojava.org/docs/api/org/biojava3/data/sequence/SequenceUtil.html > > What is it's status? Can I get it, and should it rely on it if I can? > > Thanks, > > Jon > > > _______________________________________________ > Biojava-l mailing list - [email protected] > http://lists.open-bio.org/mailman/listinfo/biojava-l _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l