access to qualities
Tony Power <[email protected]>
| Newsgroups | gmane.comp.java.bio.general |
|---|---|
| Message-ID | <CAMNg4HittTo4YKECOztrwLxXff_YX4-c_dWNgLo9bBRZjbeUdw@mail.gmail.com> |
Hi,
I am trying to access to the qualities created with the example:
FastqReader fastqReader = new SangerFastqReader();
List<DNASequence> sequences = new LinkedList<DNASequence>();
for (Fastq fastq : fastqReader.read(new File
<http://www.google.com/search?hl=en&q=allinurl%3Afile+java.sun.com&btnI=I%27m%20Feeling%20Lucky>("sanger.fastq"))){
sequences.add(FastqTools.createDNASequenceWithQualityScores(fastq));}
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