Working with mmCIF files
Phelelani Mpangase <[email protected]> Thu, 13 Jun 2013 10:11:26 +0200
| Newsgroups | gmane.comp.java.bio.general |
|---|---|
| Message-ID | <CAA5xgzJFhaAPS-SXfJ8QaU27UvZiQp4hG820S3TL7d4z18zqdQ@mail.gmail.com> |
Hello I am new to the Java progrmming language, and I am currently working on a project where I have to find information about a protein structure from the mmCIF file. I would like to extract information about non-polymers in structures (_pdbx_entity_nonpoly table) using BioJava. How do I go about achieving this? I have been able to parse the structure using the SimpleMMcifConsumer, but I am unclear as to the steps I need to follow from there. Is the PdbxEntityNonPoly the right class to use? How do I use this class to achieve to get the data from the "_pdbx_entity_nonpoly"? Regards, Phele _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l