Parsing embl format with biojava4
Dario Beraldi <[email protected]> Wed, 28 Dec 2016 09:30:54 +0000
| Newsgroups | gmane.comp.java.bio.general |
|---|---|
| Message-ID | <CAEa0nG4y01CvDTt7kcQEN=8pch70QXnj=BDGkpyJHF8Hrd0pHg@mail.gmail.com> |
--===============2759850363147520546== Content-Type: multipart/alternative; boundary=f403045f2e9a1ad8de0544b4a041 --f403045f2e9a1ad8de0544b4a041 Content-Type: text/plain; charset=UTF-8 Hello, First, thanks for the great Biojava project! Is it possible to parse embl files using (Bio)Java? By Googling "biojava embl format" I get some hits for the legacy Biojava 1.9 but I'm wondering weather I could (should?) use the more recent Biojava 4? A more general question... Which is the primary source of documentation for Biojava 4? Is it the tutorial at https://github.com/biojava/biojava-tutorial together with the Javadocs (http://biojava.org/docs/api4.2.1/)? I find the home page Biojava.org a little confusing... The tutorial page http://biojava.org/wiki/BioJava:CookBook4.0/ gives me a 404 error. The wiki pages http://biojava.org/wiki.html seem a mixture of various topics. Thank you! Dario --f403045f2e9a1ad8de0544b4a041 Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable <div dir=3D"ltr">Hello,<div><br></div><div>First, thanks for the great Bioj= ava project!</div><div><br></div><div>Is it possible to parse embl files us= ing (Bio)Java?=C2=A0</div><div><br></div><div>By Googling "biojava =C2= =A0embl format" I get some hits for the legacy Biojava 1.9 but I'm= wondering weather I could (should?) use the more recent Biojava 4?</div><d= iv><br></div><div>A more general question... Which is the primary source of= documentation for Biojava 4? Is it the tutorial at <a href=3D"https://gith= ub.com/biojava/biojava-tutorial">https://github.com/biojava/biojava-tutoria= l</a> together with the Javadocs (<a href=3D"http://biojava.org/docs/api4.2= .1/">http://biojava.org/docs/api4.2.1/</a>)?=C2=A0</div><div><br></div><div= >I find the home page Biojava.org a little confusing... The tutorial page= =C2=A0<a href=3D"http://biojava.org/wiki/BioJava:CookBook4.0/">http://bioja= va.org/wiki/BioJava:CookBook4.0/</a> gives me a 404 error. The wiki pages= =C2=A0<a href=3D"http://biojava.org/wiki.html">http://biojava.org/wiki.html= </a> seem a mixture of various topics.</div><div><br></div><div>Thank you!<= /div><div><br></div><div>Dario</div></div> --f403045f2e9a1ad8de0544b4a041-- --===============2759850363147520546== Content-Type: text/plain; charset="us-ascii" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit Content-Disposition: inline _______________________________________________ Biojava-l mailing list - [email protected] http://mailman.open-bio.org/mailman/listinfo/biojava-l --===============2759850363147520546==--