Re: Regarding in issue on the openchart not found in biojava 6.0.4

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Hi Nadeem.

Some maven repositories have changed, so some old libraries are moved.
You can add a new repository to gradle compilation. According to this
search:
https://mvnrepository.com/artifact/openchart/openchart/1.4.2
you can find this library in mvnrepository.com, so add it to your gradle
config:

// https://mvnrepository.com/artifact/openchart/openchart
implementation group: 'openchart', name: 'openchart', version: '1.4.2'

Hope it helps!

Fran


El lun, 24 ene 2022 a las 4:57, Nadeem Shakya (<
[email protected]>) escribi=C3=B3:

> Hi Jose,
>
> Thank you for the quick response.
>
> We tried the *--refresh-dependencies *option telling Gradle to ignore all
> cached entries for resolved modules and artifacts. This is what we did:
>
> *./gradlew build --refresh-dependencies*
>
>
> However, we're still getting the error:
>
> > Could not resolve all dependencies for configuration ':runtimeClasspath=
'.
>    > Could not find openchart:openchart:1.4.2.
>      Searched in the following locations:
>        -
> https://repo.maven.apache.org/maven2/openchart/openchart/1.4.2/openchart-=
1.4.2.pom
>        -
> https://repo.maven.apache.org/maven2/openchart/openchart/1.4.2/openchart-=
1.4.2.jar
>      Required by:
>          project : > org.biojava:biojava-aa-prop:6.0.4 >
> org.biojava:biojava-structure:6.0.4 > org.biojava:biojava-alignment:6.0.4=
 >
> org.biojava.thirdparty:forester:1.039
>
> Could you please let us know if we could do anything else to resolve this
> issue?
>
> Thank you.
> Best Regards,
> --
>
> *Nadeem Shakya*
> Software Engineer
> +977 9843203311
> [email protected]
> www.aspenbiosciences.com
>
>
>
> _______________________________________________
> Biojava-l mailing list  -  [email protected]
> https://mailman.open-bio.org/mailman/listinfo/biojava-l
>


--=20
Francisco Jos=C3=A9 Pe=C3=B1arrubia

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<div dir=3D"ltr">Hi Nadeem.<div><br></div><div>Some maven repositories have=
 changed, so some old libraries are moved.</div><div>You can add a new repo=
sitory=C2=A0to gradle compilation. According to this search:</div><div><a h=
ref=3D"https://mvnrepository.com/artifact/openchart/openchart/1.4.2">https:=
//mvnrepository.com/artifact/openchart/openchart/1.4.2</a><br></div><div>yo=
u can find this library in <a href=3D"http://mvnrepository.com">mvnreposito=
ry.com</a>, so add it to your gradle config:</div><div><br></div><div>// <a=
 href=3D"https://mvnrepository.com/artifact/openchart/openchart">https://mv=
nrepository.com/artifact/openchart/openchart</a><br>implementation group: &=
#39;openchart&#39;, name: &#39;openchart&#39;, version: &#39;1.4.2&#39;<br>=
</div><div><br></div><div>Hope it helps!</div><div><br></div><div>Fran</div=
><div><br></div></div><br><div class=3D"gmail_quote"><div dir=3D"ltr" class=
=3D"gmail_attr">El lun, 24 ene 2022 a las 4:57, Nadeem Shakya (&lt;<a href=
=3D"mailto:[email protected]">nadeem.shakya@aspenbioscienc=
es.com</a>&gt;) escribi=C3=B3:<br></div><blockquote class=3D"gmail_quote" s=
tyle=3D"margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);pad=
ding-left:1ex"><div dir=3D"ltr"><div dir=3D"ltr">Hi Jose,<br><br>Thank you =
for the quick response.<br><br>We tried the <i>--refresh-dependencies </i>o=
ption telling Gradle to ignore all cached entries for resolved modules and =
artifacts. This is what we did:<br><br><blockquote style=3D"margin:0px 0px =
0px 40px;border:none;padding:0px"><b>./gradlew build --refresh-dependencies=
</b></blockquote><br>However, we&#39;re still getting the error:<br><br><bl=
ockquote style=3D"margin:0px 0px 0px 40px;border:none;padding:0px"><font fa=
ce=3D"monospace">&gt; Could not resolve all dependencies for configuration =
&#39;:runtimeClasspath&#39;.<br>=C2=A0 =C2=A0&gt; Could not find openchart:=
openchart:1.4.2.<br>=C2=A0 =C2=A0 =C2=A0Searched in the following locations=
:<br>=C2=A0 =C2=A0 =C2=A0 =C2=A0- <a href=3D"https://repo.maven.apache.org/=
maven2/openchart/openchart/1.4.2/openchart-1.4.2.pom" target=3D"_blank">htt=
ps://repo.maven.apache.org/maven2/openchart/openchart/1.4.2/openchart-1.4.2=
.pom</a><br>=C2=A0 =C2=A0 =C2=A0 =C2=A0- <a href=3D"https://repo.maven.apac=
he.org/maven2/openchart/openchart/1.4.2/openchart-1.4.2.jar" target=3D"_bla=
nk">https://repo.maven.apache.org/maven2/openchart/openchart/1.4.2/openchar=
t-1.4.2.jar</a><br>=C2=A0 =C2=A0 =C2=A0Required by:<br>=C2=A0 =C2=A0 =C2=A0=
 =C2=A0 =C2=A0project : &gt; org.biojava:biojava-aa-prop:6.0.4 &gt; org.bio=
java:biojava-structure:6.0.4 &gt; org.biojava:biojava-alignment:6.0.4 &gt; =
org.biojava.thirdparty:forester:1.039<br><br></font></blockquote></div><div=
 class=3D"gmail_quote"><div class=3D"gmail_attr">Could you please let us kn=
ow if we could do anything else to resolve this issue?<br><br>Thank you.<br=
>Best Regards,</div></div>-- <br><div dir=3D"ltr"><div dir=3D"ltr"><img src=
=3D"https://docs.google.com/uc?export=3Ddownload&amp;id=3D1LbKJMllA4ONyZFfG=
nR_sPi7GarwdRL8f&amp;revid=3D0B0HZcYjPxDPsanR2VmZCYmIwK3YwdU55VnhmTDF0OWZvS=
G13PQ"><br><div><div style=3D"margin-bottom:8px"><p style=3D"margin:0px;tex=
t-transform:capitalize"></p><div dir=3D"ltr" style=3D"color:rgb(136,136,136=
);font-family:Arial,Helvetica,sans-serif;font-size:small;font-style:normal;=
font-weight:400;letter-spacing:normal;text-align:start;text-indent:0px;text=
-transform:none;white-space:normal;word-spacing:0px;background-color:rgb(25=
5,255,255)"><div dir=3D"ltr"><div dir=3D"ltr"><div dir=3D"ltr"><div dir=3D"=
ltr"><div style=3D"color:rgb(136,136,136)"><div dir=3D"ltr" style=3D"color:=
rgb(32,33,36)"><div dir=3D"ltr"><div dir=3D"ltr"><div dir=3D"ltr"><div dir=
=3D"ltr"></div></div></div></div></div></div></div></div></div></div></div>=
<p></p><div style=3D"color:rgb(136,136,136);font-family:Arial,Helvetica,san=
s-serif;font-size:small;font-style:normal;font-weight:400;letter-spacing:no=
rmal;text-align:start;text-indent:0px;text-transform:none;white-space:norma=
l;word-spacing:0px;background-color:rgb(255,255,255)"><b><font color=3D"#66=
6666">Nadeem Shakya</font></b><br></div><div style=3D"color:rgb(136,136,136=
)">Software Engineer</div><div style=3D"color:rgb(136,136,136)"><span style=
=3D"color:rgb(68,68,68);text-transform:capitalize">+977 9843203311</span><b=
r></div><div><a href=3D"mailto:[email protected]" style=3D=
"color:rgb(17,85,204)" target=3D"_blank"><font color=3D"#666666">nadeem.sha=
[email protected]</font></a><font color=3D"#666666"><br></font><a hr=
ef=3D"http://www.aspenbiosciences.com/" style=3D"color:rgb(17,85,204)" targ=
et=3D"_blank"><font color=3D"#444444">www.aspenbiosciences.com</font></a><b=
r></div><p style=3D"margin:0px;text-transform:capitalize"><span style=3D"co=
lor:rgb(68,68,68)"><br></span></p><p style=3D"margin:0px;text-transform:cap=
italize"><br></p></div></div></div></div></div>
_______________________________________________<br>
Biojava-l mailing list=C2=A0 -=C2=A0 <a href=3D"mailto:[email protected]=
g" target=3D"_blank">[email protected]</a><br>
<a href=3D"https://mailman.open-bio.org/mailman/listinfo/biojava-l" rel=3D"=
noreferrer" target=3D"_blank">https://mailman.open-bio.org/mailman/listinfo=
/biojava-l</a><br>
</blockquote></div><br clear=3D"all"><div><br></div>-- <br><div dir=3D"ltr"=
 class=3D"gmail_signature"><div dir=3D"ltr">Francisco Jos=C3=A9 Pe=C3=B1arr=
ubia<br><br></div></div>

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