Re: Regarding in issue on the openchart not found in biojava 6.0.4

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Hi Nadeem.
Yes, you can add repositories to gradle build.
Please, have a look to this link:

https://www.javatpoint.com/gradle-repository

Just edit build.gradle file and add something like


   1. repositories {
   2.     maven {
   3.         url 'https://mvnrepository.com/'
   4.     }
   5. }


Hope it helps.

Fran.

El lun, 24 ene 2022 a las 12:27, Nadeem Shakya (<
[email protected]>) escribi=C3=B3:

> Hi Francisco,
>
> Thank you for the suggestion.
>
> We'd tried that as well. We'd added *openchart* dependency to our gradle
> config. This is what we did:
>
>     // https://mvnrepository.com/artifact/openchart/openchart
>     implementation group: 'openchart', name: 'openchart', version: '1.4.2=
'
>
>     compile group: 'org.biojava', name: 'biojava-core', version: '6.0.4'
>     compile group: 'org.biojava', name: 'biojava-aa-prop', version: '6.0.=
4'
>     compile group: 'org.biojava', name: 'alignment', version: '1.9.5'
>
> However, it still gives out the error. We're guessing this is because
> *openchart* is not in *Central** Repository*, but is in *JBoss 3rd-party
> Repository.*
>
> Having said that, we would really appreciate it if you could tell us if
> there are other ways we can fix this issue.
>
> Thank you.
> Warm regards,
> --
>
> *Nadeem Shakya*
> Software Engineer
> +977 9843203311
> [email protected]
> www.aspenbiosciences.com
>
>
>
>

--=20
Francisco Jos=C3=A9 Pe=C3=B1arrubia

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<div dir=3D"ltr"><div dir=3D"ltr">Hi Nadeem.<div>Yes, you can add repositor=
ies to gradle build.</div><div>Please, have a look to this link:</div><div>=
<br></div><div><a href=3D"https://www.javatpoint.com/gradle-repository">htt=
ps://www.javatpoint.com/gradle-repository</a><br></div><div><br></div><div>=
Just edit build.gradle file and add something like=C2=A0</div><div><br></di=
v><div><ol start=3D"1" class=3D"gmail-dp-j" style=3D"margin:0px;padding:0px=
;border:none;color:rgb(51,51,51);font-family:inter-regular,system-ui,-apple=
-system,BlinkMacSystemFont,&quot;Segoe UI&quot;,Roboto,&quot;Helvetica Neue=
&quot;,Helvetica,Arial,sans-serif;font-size:16px;text-align:justify;backgro=
und-color:rgba(214,189,189,0.3)"><li class=3D"gmail-alt" style=3D"width:848=
.75px;margin:4px 0px 0px;border:none;line-height:25px;color:rgb(0,0,0);padd=
ing:0px 3px 0px 10px"><span style=3D"margin:0px;padding:0px;border:none;bac=
kground-color:inherit"><span style=3D"margin:0px;padding:0px;border:none;ba=
ckground-color:inherit">repositories=C2=A0{=C2=A0=C2=A0</span></span></li><=
li class=3D"gmail-" style=3D"margin:4px 0px 0px;border:none;line-height:25p=
x;color:rgb(0,0,0);padding:0px 3px 0px 10px"><span style=3D"margin:0px;padd=
ing:0px;border:none;background-color:inherit">=C2=A0=C2=A0=C2=A0=C2=A0maven=
=C2=A0{=C2=A0=C2=A0</span></li><li class=3D"gmail-alt" style=3D"width:848.7=
5px;margin:4px 0px 0px;border:none;line-height:25px;color:rgb(0,0,0);paddin=
g:0px 3px 0px 10px"><span style=3D"margin:0px;padding:0px;border:none;backg=
round-color:inherit">=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0url=C2=
=A0<span class=3D"gmail-string" style=3D"margin:0px;padding:0px;border:none=
;color:rgb(0,0,255);background-color:inherit">&#39;<a href=3D"https://mvnre=
pository.com/">https://mvnrepository.com/</a>&#39;<br></span></span></li><l=
i class=3D"gmail-" style=3D"margin:4px 0px 0px;border:none;line-height:25px=
;color:rgb(0,0,0);padding:0px 3px 0px 10px"><span style=3D"margin:0px;paddi=
ng:0px;border:none;background-color:inherit">=C2=A0=C2=A0=C2=A0=C2=A0}=C2=
=A0=C2=A0</span></li><li class=3D"gmail-alt" style=3D"width:848.75px;margin=
:4px 0px 0px;border:none;line-height:25px;color:rgb(0,0,0);padding:0px 3px =
0px 10px"><span style=3D"margin:0px;padding:0px;border:none;background-colo=
r:inherit">}=C2=A0=C2=A0</span></li></ol></div></div><br><div class=3D"gmai=
l_quote"><div class=3D"gmail_attr">Hope it helps.</div><div class=3D"gmail_=
attr"><br></div><div class=3D"gmail_attr">Fran.<br></div><div dir=3D"ltr" c=
lass=3D"gmail_attr"><br></div><div dir=3D"ltr" class=3D"gmail_attr">El lun,=
 24 ene 2022 a las 12:27, Nadeem Shakya (&lt;<a href=3D"mailto:nadeem.shaky=
[email protected]">[email protected]</a>&gt;) escribi=
=C3=B3:<br></div><blockquote class=3D"gmail_quote" style=3D"margin:0px 0px =
0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir=
=3D"ltr"><div dir=3D"ltr">Hi Francisco,<div><br></div><div>Thank you for th=
e suggestion.</div><div><br></div><div>We&#39;d tried that as well. We&#39;=
d added <i>openchart</i> dependency to our gradle config. This is what we d=
id:</div><div><br></div><div><font face=3D"monospace">=C2=A0 =C2=A0 // <a h=
ref=3D"https://mvnrepository.com/artifact/openchart/openchart" target=3D"_b=
lank">https://mvnrepository.com/artifact/openchart/openchart</a><br>=C2=A0 =
=C2=A0 implementation group: &#39;openchart&#39;, name: &#39;openchart&#39;=
, version: &#39;1.4.2&#39;<br><br>=C2=A0 =C2=A0 compile group: &#39;org.bio=
java&#39;, name: &#39;biojava-core&#39;, version: &#39;6.0.4&#39;<br>=C2=A0=
 =C2=A0 compile group: &#39;org.biojava&#39;, name: &#39;biojava-aa-prop&#3=
9;, version: &#39;6.0.4&#39;<br>=C2=A0 =C2=A0 compile group: &#39;org.bioja=
va&#39;, name: &#39;alignment&#39;, version: &#39;1.9.5&#39;</font><br></di=
v><div><font face=3D"monospace"><br></font></div><div><font face=3D"arial, =
sans-serif">However, it still gives out the error. We&#39;re guessing this =
is because <i>openchart</i> is not in <b>Central</b><b> Repository</b>, but=
 is in=C2=A0</font><b>JBoss 3rd-party Repository.</b>=C2=A0</div><div><br><=
/div><div>Having said that, we would really=C2=A0appreciate it if you could=
 tell us if there are other ways we can fix this issue.</div><div><br></div=
><div>Thank you.</div></div><div class=3D"gmail_quote"><div class=3D"gmail_=
attr">Warm=C2=A0regards,</div></div>-- <br><div dir=3D"ltr"><div dir=3D"ltr=
"><img src=3D"https://docs.google.com/uc?export=3Ddownload&amp;id=3D1LbKJMl=
lA4ONyZFfGnR_sPi7GarwdRL8f&amp;revid=3D0B0HZcYjPxDPsanR2VmZCYmIwK3YwdU55Vnh=
mTDF0OWZvSG13PQ"><br><div><div style=3D"margin-bottom:8px"><p style=3D"marg=
in:0px;text-transform:capitalize"></p><div dir=3D"ltr" style=3D"color:rgb(1=
36,136,136);font-family:Arial,Helvetica,sans-serif;font-size:small;font-sty=
le:normal;font-weight:400;letter-spacing:normal;text-align:start;text-inden=
t:0px;text-transform:none;white-space:normal;word-spacing:0px;background-co=
lor:rgb(255,255,255)"><div dir=3D"ltr"><div dir=3D"ltr"><div dir=3D"ltr"><d=
iv dir=3D"ltr"><div style=3D"color:rgb(136,136,136)"><div dir=3D"ltr" style=
=3D"color:rgb(32,33,36)"><div dir=3D"ltr"><div dir=3D"ltr"><div dir=3D"ltr"=
><div dir=3D"ltr"></div></div></div></div></div></div></div></div></div></d=
iv></div><p></p><div style=3D"color:rgb(136,136,136);font-family:Arial,Helv=
etica,sans-serif;font-size:small;font-style:normal;font-weight:400;letter-s=
pacing:normal;text-align:start;text-indent:0px;text-transform:none;white-sp=
ace:normal;word-spacing:0px;background-color:rgb(255,255,255)"><b><font col=
or=3D"#666666">Nadeem Shakya</font></b><br></div><div style=3D"color:rgb(13=
6,136,136)">Software Engineer</div><div style=3D"color:rgb(136,136,136)"><s=
pan style=3D"color:rgb(68,68,68);text-transform:capitalize">+977 9843203311=
</span><br></div><div><a href=3D"mailto:[email protected]"=
 style=3D"color:rgb(17,85,204)" target=3D"_blank"><font color=3D"#666666">n=
[email protected]</font></a><font color=3D"#666666"><br></f=
ont><a href=3D"http://www.aspenbiosciences.com/" style=3D"color:rgb(17,85,2=
04)" target=3D"_blank"><font color=3D"#444444">www.aspenbiosciences.com</fo=
nt></a><br></div><p style=3D"margin:0px;text-transform:capitalize"><span st=
yle=3D"color:rgb(68,68,68)"><br></span></p><p style=3D"margin:0px;text-tran=
sform:capitalize"><br></p></div></div></div></div></div>
</blockquote></div><br clear=3D"all"><div><br></div>-- <br><div dir=3D"ltr"=
 class=3D"gmail_signature"><div dir=3D"ltr">Francisco Jos=C3=A9 Pe=C3=B1arr=
ubia<br><br></div></div></div>

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