Re: using Bio::SeqIO to convert from table to genbank format ..... attribute_map example
Brian Osborne <[email protected]> Mon, 21 Sep 2015 10:32:48 -0400
| Newsgroups | gmane.comp.lang.perl.bio.general |
|---|---|
| Message-ID | <[email protected]> |
Malcolm, Done, in master. That “can not write to a generic …” error was due to the fact that write_seq() is not implemented for SeqIO::table, but someone forgot to put an “empty” write_seq() method into the module to catch any attempts. Fixed. Brian O. > On Sep 21, 2015, at 9:18 AM, Brian Osborne <[email protected]> wrote: > > Working on this …. > >> On Sep 14, 2015, at 10:44 AM, Cook, Malcolm <[email protected] <mailto:[email protected]>> wrote: >> >> '$out = Bio::SeqIO->new(-format => qq{table}); > > _______________________________________________ > Bioperl-l mailing list > [email protected] > http://mailman.open-bio.org/mailman/listinfo/bioperl-l _______________________________________________ Bioperl-l mailing list [email protected] http://mailman.open-bio.org/mailman/listinfo/bioperl-l