Re: module Bio::TreeIO

"Fields, Christopher J" <[email protected]> Tue, 10 May 2016 14:06:27 +0000
Newsgroups gmane.comp.lang.perl.bio.general
Message-ID <[email protected]>
You can either submit a Github Issue or fork the repo, generate the document fix, then generate a pull request (we accept either, though pull requests make our life a lot easier :)

chris

> On May 10, 2016, at 7:54 AM, lskatz <[email protected]> wrote:
> 
> That's what I thought originally too but the R package made it look like
> there might be some magic bootstrapping going on with distances alone.  If
> there truly is no distance-matrix bootstrapping algorithm then I am left to
> my devices and at least I can make use of assess_bootstrap().
> 
> By the way, if I can make a documentation bug report -- it looks like
> assess_bootstrap() only takes a list of trees as an argument but when I look
> at the source code it looks like it also can take a guide tree as a second
> parameter.  That second parameter is not in the documentation.  How would I
> specifically report that?
> 
> 
> 
> --
> View this message in context: http://bioperl.996286.n3.nabble.com/Re-module-Bio-TreeIO-tp12257p17852.html
> Sent from the Bioperl-L mailing list archive at Nabble.com.
> _______________________________________________
> Bioperl-l mailing list
> [email protected]
> http://mailman.open-bio.org/mailman/listinfo/bioperl-l