Re: module Bio::TreeIO

lskatz <[email protected]> Tue, 10 May 2016 13:41:53 -0700 (MST)

Newsgroups	gmane.comp.lang.perl.bio.general
Message-ID	<[email protected]>

Never mind, I finished a first draft faster than I thought I would.  Please
send me any pull requests.  I think this will be a really useful script.

https://github.com/lskatz/lskScripts/blob/master/mashtree.pl

Pull requests for mashtree.pl are encouraged.  Please be kind to my code and
please keep it commented :)

My first speed test with 20 fastq.gz files, with 10 bootstraps (and one
tree) was 94 seconds with 32 cpus.



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