Re: issue writing to pipe with bio sequoia

Hi Stephane,

The website source for that page is now here:

https://github.com/bioperl/bioperl.github.io/blob/master/howtos/SeqIO_HOWTO.md

You can edit it within the GitHub web interface and make a pull request
(remember to check the preview).

Chris etc: Can you apply something like this to add an edit button/link to
each page?

https://github.com/biopython/biopython.github.io/issues/14
https://github.com/biopython/biopython.github.io/commit/a2b3c5bd551fbfe8b41192d4ae6660b4bb2a68bb

Regards,

Peter

On Wed, Jun 1, 2016 at 9:28 AM, Stephane Plaisance | VIB | <
[email protected]> wrote:

> Thanks a lot Chris,
>
> Your code example is much more instructive than the text I found on the IO
> man pages.
> If someone has access to (http://bioperl.org/howtos/SeqIO_HOWTO.html) and
> could edit some examples for saving to bgzip it would probably help others.
> My code now works like a charm and I generate smaller compressed and tabix
> index-able bgzip Fasta instead of huge plain files.
>
> THANKS to ALL who helped me
>
> Stephane
>
>

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