Re: [ITK-users] Fwd: [ITK] 3D registration with level set motion
Dženan Zukić <[email protected]>
| Newsgroups | gmane.comp.lib.itk.user |
|---|---|
| Message-ID | <CAPf2UMTPY+EFDp_NWyHf7CH6yi_neNqcvK9U_4H6i03TURpLpA@mail.gmail.com> |
Hi Marie, an obvious thing to ask: are you running it in debug or release mode? The difference is usually huge. B-spline registration for your image could take a few minutes - 20 minutes for a single iteration sounds too long. A classic trick for speeding up registration is using multi-resolution approach. It usually involves more code and a lot more testing, though. Regards, Dženan Zukić, PhD, Senior R&D Engineer, Kitware (Carrboro, N.C.) On Sat, Aug 5, 2017 at 4:00 PM, CocoM <[email protected]> wrote: > Thanks a lot it's almost working now! > > I have another question, about the running time. > I don't know anything about it but I'm surprised by the time needed for the > algorithm to be done. I'm using the example DeformableRegistration5 (level > set PDE solving), but I changed it to use B-spline interpolation. The > running time is huge for 3D ; for 2D it takes a little less than 3 minutes > and for 3D, I need approximately 20 minutes by iteration, so imagine the > time needed by the whole process... My test image is 512x512x43, the > algorithm is multi threads. I'm working on a six years old Asus laptop > (X53S), nothing extraordinary. I couldn't say exactly what my CPU is but > it's a Intel core i5. I know it's not great material but still, I feel like > it's very slow. So could someone tell me if it's normal? > > The thing is I didn't change much, so I guess it is, but I wanted to ask > anyway. > > Plus, if anyone has any idea to speed up the process, except buying a > better > computer, it would be really great! > > Thanks a lot, > Marie > > > > -- > View this message in context: http://itk-insight-users. > 2283740.n2.nabble.com/3D-registration-with-level-set- > motion-tp7590137p7590155.html > Sent from the ITK Insight Users mailing list archive at Nabble.com. > _____________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://www.kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > http://public.kitware.com/mailman/listinfo/insight-users > _____________________________________ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Kitware offers ITK Training Courses, for more information visit: http://www.kitware.com/products/protraining.php Please keep messages on-topic and check the ITK FAQ at: http://www.itk.org/Wiki/ITK_FAQ Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/insight-users