Re: [ITK-users] 3D rigid transform
Dženan Zukić <[email protected]> Fri, 7 Sep 2018 16:10:11 -0400
| Newsgroups | gmane.comp.lib.itk.user |
|---|---|
| Message-ID | <CAPf2UMSxkC3+mUqW=2=kDUcUF5AHeJhR=LSzHD-8Nk57i606Tg@mail.gmail.com> |
--===============0384201186== Content-Type: multipart/alternative; boundary="000000000000032b8c05754d9999" --000000000000032b8c05754d9999 Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable Hi Vijaya, Fixed parameters are not optimized when a transform is used in image registration. Center of rotation is usually the fixedparameter. That is the case with Euler <https://itk.org/Doxygen/html/classitk_1_1Euler3DTransform.html>, Quat <https://itk.org/Doxygen/html/classitk_1_1QuaternionRigidTransform.html> an= d Versor <https://itk.org/Doxygen/html/classitk_1_1VersorRigid3DTransform.html> rigi= d 3D transforms. More transform types are listed here <https://itk.org/Doxygen/html/group__ITKTransform.html>. This example <https://itk.org/ITKExamples/src/Filtering/ImageGrid/ResampleAnImage/Docume= ntation.html>, and this example <https://itk.org/Wiki/ITK/Examples/SimpleOperations/TranslationTransform> m= ight help you about how to set parameters and use a transform. Regards, D=C5=BEenan On Fri, Sep 7, 2018 at 7:30 AM Vijaya Ghorpade via Insight-users < [email protected]> wrote: > Hi > Before asking this question I searched the whole archive. I am new here. > I would like to resample an MRI image after applying 3D rigid transform > (Rotation followed by translation). I found euler3dtransform and > quaternion3d. The documentation is not suffice to see how to use it > completely. What are parameters and fixed parameters. How to give suppose > three angles a, b, c and 3 transtalations x ,y, z to these functions. > Please help me. > Thank you so much in advance, > The ITK community is transitioning from this mailing list to > discourse.itk.org. Please join us there! > ________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Kitware offers ITK Training Courses, for more information visit: > http://www.kitware.com/products/protraining.php > > Please keep messages on-topic and check the ITK FAQ at: > http://www.itk.org/Wiki/ITK_FAQ > > Follow this link to subscribe/unsubscribe: > https://itk.org/mailman/listinfo/insight-users > --000000000000032b8c05754d9999 Content-Type: text/html; charset="UTF-8" Content-Transfer-Encoding: quoted-printable <div dir=3D"ltr"><div dir=3D"ltr"><div class=3D"gmail_default" style=3D"fon= t-family:verdana,sans-serif;font-size:small">Hi Vijaya,</div><div class=3D"= gmail_default" style=3D"font-family:verdana,sans-serif;font-size:small"><br= ></div><div class=3D"gmail_default" style=3D"font-family:verdana,sans-serif= ;font-size:small">Fixed parameters are not optimized when a transform is us= ed in image registration. Center of rotation is usually the fixedparameter.= That is the case with <a href=3D"https://itk.org/Doxygen/html/classitk_1_1= Euler3DTransform.html">Euler</a>, <a href=3D"https://itk.org/Doxygen/html/c= lassitk_1_1QuaternionRigidTransform.html">Quat</a>=C2=A0and <a href=3D"http= s://itk.org/Doxygen/html/classitk_1_1VersorRigid3DTransform.html">Versor</a= >=C2=A0rigid 3D transforms. More transform types are listed <a href=3D"http= s://itk.org/Doxygen/html/group__ITKTransform.html">here</a>. This=C2=A0<a h= ref=3D"https://itk.org/ITKExamples/src/Filtering/ImageGrid/ResampleAnImage/= Documentation.html">example</a>, and this <a href=3D"https://itk.org/Wiki/I= TK/Examples/SimpleOperations/TranslationTransform">example</a>=C2=A0might h= elp you about how to set parameters and use a transform.</div><div class=3D= "gmail_default" style=3D"font-family:verdana,sans-serif;font-size:small"><b= r></div><div class=3D"gmail_default" style=3D"font-family:verdana,sans-seri= f;font-size:small">Regards,</div><div class=3D"gmail_default" style=3D"font= -family:verdana,sans-serif;font-size:small">D=C5=BEenan</div></div></div><b= r><div class=3D"gmail_quote"><div dir=3D"ltr">On Fri, Sep 7, 2018 at 7:30 A= M Vijaya Ghorpade via Insight-users <<a href=3D"mailto:insight-users@itk= .org">[email protected]</a>> wrote:<br></div><blockquote class=3D"gm= ail_quote" style=3D"margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-le= ft:1ex"><font color=3D"" size=3D"2" face=3D"Helvetica Neue"><font face=3D"A= rial, Helvetica, sans-serif">Hi</font> <div><font face=3D"Arial, Helvetica, sans-serif">Before asking this questio= n I searched the whole archive. I am new here.=C2=A0 I would like to resamp= le an MRI image after applying 3D rigid transform (Rotation followed by tra= nslation). I found euler3dtransform and quaternion3d. The documentation is = not suffice to see how to use it completely. What are parameters and fixed = parameters. How to give suppose three angles a, b, c and 3 transtalations x= ,y, z to these functions. Please help me.=C2=A0</font></div> <div><font face=3D"Arial, Helvetica, sans-serif">Thank you so much in advan= ce,</font></div> </font>The ITK community is transitioning from this mailing list to <a href= =3D"http://discourse.itk.org" rel=3D"noreferrer" target=3D"_blank">discours= e.itk.org</a>. Please join us there!<br> ________________________________<br> Powered by <a href=3D"http://www.kitware.com" rel=3D"noreferrer" target=3D"= _blank">www.kitware.com</a><br> <br> Visit other Kitware open-source projects at<br> <a href=3D"http://www.kitware.com/opensource/opensource.html" rel=3D"norefe= rrer" target=3D"_blank">http://www.kitware.com/opensource/opensource.html</= a><br> <br> Kitware offers ITK Training Courses, for more information visit:<br> <a href=3D"http://www.kitware.com/products/protraining.php" rel=3D"noreferr= er" target=3D"_blank">http://www.kitware.com/products/protraining.php</a><b= r> <br> Please keep messages on-topic and check the ITK FAQ at:<br> <a href=3D"http://www.itk.org/Wiki/ITK_FAQ" rel=3D"noreferrer" target=3D"_b= lank">http://www.itk.org/Wiki/ITK_FAQ</a><br> <br> Follow this link to subscribe/unsubscribe:<br> <a href=3D"https://itk.org/mailman/listinfo/insight-users" rel=3D"noreferre= r" target=3D"_blank">https://itk.org/mailman/listinfo/insight-users</a><br> </blockquote></div> --000000000000032b8c05754d9999-- --===============0384201186== Content-Type: text/plain; charset="us-ascii" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit Content-Disposition: inline The ITK community is transitioning from this mailing list to discourse.itk.org. Please join us there! ________________________________ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Kitware offers ITK Training Courses, for more information visit: http://www.kitware.com/products/protraining.php Please keep messages on-topic and check the ITK FAQ at: http://www.itk.org/Wiki/ITK_FAQ Follow this link to subscribe/unsubscribe: https://itk.org/mailman/listinfo/insight-users --===============0384201186==--