tree/cotree extraction
David Hysom <[email protected]> Wed, 20 Apr 2005 14:51:45 -0700 (PDT)
| Newsgroups | gmane.comp.mathematics.csc |
|---|---|
| Message-ID | <[email protected]> |
All, A colleague of mine inquired about algorithms for extracting trees and cotrees from a graph. After some clarification, his conditions and requirements appear to be: 1. the graph results from a finite element dicredtization of a 3D pde; the graph is irregular---some nodes have more edges connected to them than others; 2. he's interested in practice, not theory; 3. the tree should have "branches that are about the same size," by which I believe he means for any node in the tree, the subtree rooted at the node's children should contain approximately the same number of nodes (i.e., balanced tree); 4. he's looking for a sequential algorithm, but will eventually be interested in a parallel algorithm; at present he's working with 0.5 billion nodes; 5. there is no restriction on choosing the root node; 6. I'm guessing the tree should be as bushy as possible so as to minimize the distance from the root to leaf nodes. I immediately thought of breadth first search, but don't know about dealing with requirements (3) and (6). I suspect one would want to start by finding a "centermost" node and using that as the root. Any thoughts or references on these issues would be greatly appreciated. thanks, David Hysom Center for Advanced Scientific Computing Lawrence Livermore Nat. Lab.