Re: "pip install scons" result in a broken installation that is unusable

On October 11, 2018 3:03:41 AM MDT, "Fux  Samuel (ID SIS)" <[email protected]> wrote:
>Hi Bill,
>
>Thank you for your reply. I updated pip, but scons is still broken:
>[sfux@lo-login-02 ~]$ pip install --upgrade pip
>Collecting pip
>Downloading
>https://files.pythonhosted.org/packages/c2/d7/90f34cb0d83a6c5631cf71dfe64cc1054598c843a92b400e55675cc2ac37/pip-18.1-py2.py3-none-any.whl
>(1.3MB)
>    100% |████████████████████████████████| 1.3MB 763kB/s
>Installing collected packages: pip
>  Found existing installation: pip 9.0.3
>    Uninstalling pip-9.0.3:
>      Successfully uninstalled pip-9.0.3
>Successfully installed pip-18.1
>[sfux@lo-login-02 ~]$ pip install scons
>Collecting scons
>Installing collected packages: scons
>Successfully installed scons-3.0.1
>[sfux@lo-login-02 ~]$ scons
>SCons import failed. Unable to find engine files in:
>  /cluster/apps/python/2.7.14_cpu/bin/../engine
>  /cluster/apps/python/2.7.14_cpu/bin/scons-local-3.0.1
>  /cluster/apps/python/2.7.14_cpu/bin/scons-local
>/cluster/apps/python/2.7.14_cpu/lib64/python2.7/site-packages/lib/scons-3.0.1
>  /cluster/apps/python/2.7.14_cpu/lib/scons-3.0.1
>  /cluster/apps/python/2.7.14_cpu/lib/scons-3.0.1
>/cluster/apps/python/2.7.14_cpu/lib64/python2.7/site-packages/lib/python2.7/site-packages/scons-3.0.1
>/cluster/apps/python/2.7.14_cpu/lib/python2.7/site-packages/scons-3.0.1
>/cluster/apps/python/2.7.14_cpu/lib/python2.7/site-packages/scons-3.0.1
>  /cluster/apps/python/2.7.14_cpu/lib64/scons-3.0.1
>/cluster/apps/python/2.7.14_cpu/lib64/python2.7/site-packages/lib/scons
>  /cluster/apps/python/2.7.14_cpu/lib/scons
>  /cluster/apps/python/2.7.14_cpu/lib/scons
>/cluster/apps/python/2.7.14_cpu/lib64/python2.7/site-packages/lib/python2.7/site-packages/scons
>  /cluster/apps/python/2.7.14_cpu/lib/python2.7/site-packages/scons
>  /cluster/apps/python/2.7.14_cpu/lib/python2.7/site-packages/scons
>  /cluster/apps/python/2.7.14_cpu/lib64/scons
>Traceback (most recent call last):
>File "/cluster/apps/python/2.7.14_cpu/bin/scons", line 192, in <module>
>    import SCons.Script
>ImportError: No module named SCons.Script
>[sfux@lo-login-02 ~]$
>The following workaround fixes the problem
>export
>SCONS_LIB_DIR=/cluster/apps/python/2.7.14_cpu/lib64/python2.7/site-packages/scons-3.0.1
>This is not my preferred solution as I would like to avoid setting
>environment variables for all users that use Python on our hpc cluster
>if it is only required for Scons.
>
>The issues arises from line 157 in
>/cluster/apps/python/2.7.14_cpu/bin/scons:
>    temp = [os.path.join(x, 'lib') for x in prefs]
>Because of adding "lib", to the guess for the path of the scons files,
>scons searches in
>/cluster/apps/python/2.7.14_cpu/lib64/python2.7/site-packages/lib/scons-3.0.1
>instead of
>/cluster/apps/python/2.7.14_cpu/lib64/python2.7/site-packages/scons-3.0.1
>After changing
>   temp = [os.path.join(x, 'lib') for x in prefs]
>to
>   temp = [os.path.join(x, '') for x in prefs]
>scons does not show this error any more:
>[sfux@lo-login-02 bin]$ scons
>
>scons: *** No SConstruct file found.
>File
>"/cluster/apps/python/2.7.14_cpu/lib64/python2.7/site-packages/scons-3.0.1/SCons/Script/Main.py",
>line 924, in _main
>[sfux@lo-login-02 bin]$
>I will use this workaround as it avoids setting environment variables.
>It is clear to me, that this only fixes the problem on our system, and
>maybe for other sites there is a different solution required.
>
>Would it make sense to open an issue on github to share my findings, as
>it seems that many people are facing this problem ?
>
>  *   https://github.com/FPGAwars/apio/issues/143
>  *   https://github.com/Homebrew/legacy-homebrew/issues/5794
>*  
>https://stackoverflow.com/questions/24897687/import-failed-unable-to-find-scons-files-import-scons-script
>*  
>https://stackoverflow.com/questions/24897687/import-failed-unable-to-find-scons-files-import-scons-script/32540784
>*  
>http://scons.1086193.n5.nabble.com/SCons-can-t-correctly-install-via-pip-when-not-in-a-virtualenv-td42715.html
>*  
>https://pairlist4.pair.net/pipermail/scons-users/2017-December/006589.html
>
>Best regards
>
>Sam
>
>--
>ETH Zurich, Dr. sc. ETH Samuel Fux
>High Performance Computing, Scientific IT Services
>WEC D 13, Weinbergstrasse 11, 8092 Zurich, Switzerland
>Phone +41 44 632 57 63, http://www.id.ethz.ch/
>[email protected]
>________________________________
>Von: Scons-users [[email protected]]" im Auftrag von "Bill
>Deegan [[email protected]]
>Gesendet: Mittwoch, 10. Oktober 2018 18:42
>An: SCons users mailing list
>Betreff: Re: [Scons-users] "pip install scons" result in a broken
>installation that is unusable
>
>Sam,
>
>Try:
>
># update your pip and wheel package there have been significant changes
>since py 2.7.14
>pip install -U pip wheel
>Then retry installing scons.
>
>-Bill
>
>On Wed, Oct 10, 2018 at 3:53 AM Fux Samuel (ID SIS)
><[email protected]<mailto:[email protected]>> wrote:
>Hi,
>
>I installed scons 3.0.1 with the command
>pip install scons
>on our hpc cluster, using Python 2.7.14. The installation seems to be
>pretty broken:
>[sfux@lo-login-02 ~]$ pip install scons
>Collecting scons
>Installing collected packages: scons
>Successfully installed scons-3.0.1
>You are using pip version 9.0.3, however version 18.1 is available.
>You should consider upgrading via the 'pip install --upgrade pip'
>command.
>[sfux@lo-login-02 ~]$ scons
>SCons import failed. Unable to find engine files in:
>  /cluster/apps/python/2.7.14/bin/../engine
>  /cluster/apps/python/2.7.14/bin/scons-local-3.0.1
>  /cluster/apps/python/2.7.14/bin/scons-local
>/cluster/apps/python/2.7.14/lib64/python2.7/site-packages/lib/scons-3.0.1
>  /cluster/apps/python/2.7.14/lib/scons-3.0.1
>  /cluster/apps/python/2.7.14/lib/scons-3.0.1
>/cluster/apps/python/2.7.14/lib64/python2.7/site-packages/lib/python2.7/site-packages/scons-3.0.1
>  /cluster/apps/python/2.7.14/lib/python2.7/site-packages/scons-3.0.1
>  /cluster/apps/python/2.7.14/lib/python2.7/site-packages/scons-3.0.1
>  /cluster/apps/python/2.7.14/lib64/scons-3.0.1
>  /cluster/apps/python/2.7.14/lib64/python2.7/site-packages/lib/scons
>  /cluster/apps/python/2.7.14/lib/scons
>  /cluster/apps/python/2.7.14/lib/scons
>/cluster/apps/python/2.7.14/lib64/python2.7/site-packages/lib/python2.7/site-packages/scons
>  /cluster/apps/python/2.7.14/lib/python2.7/site-packages/scons
>  /cluster/apps/python/2.7.14/lib/python2.7/site-packages/scons
>  /cluster/apps/python/2.7.14/lib64/scons
>Traceback (most recent call last):
>  File "/cluster/apps/python/2.7.14/bin/scons", line 192, in <module>
>    import SCons.Script
>ImportError: No module named SCons.Script
>[sfux@lo-login-02 ~]$ which python
>/cluster/apps/python/2.7.14/bin/python
>[sfux@lo-login-02 ~]$ which pip
>/cluster/apps/python/2.7.14/bin/pip
>[sfux@lo-login-02 ~]$ cat /etc/redhat-release
>CentOS Linux release 7.5.1804 (Core)
>[sfux@lo-login-02 ~]$
>Is this a known problem ?
>
>Can scons be installed with pip without using a virtualenv ?
>
>Best regards
>
>Sam
>
>--
>ETH Zurich, Dr. sc. ETH Samuel Fux
>High Performance Computing, Scientific IT Services
>WEC D 13, Weinbergstrasse 11, 8092 Zurich, Switzerland
>Phone +41 44 632 57 63, http://www.id.ethz.ch/
>[email protected]<mailto:[email protected]>
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there's some dodgy logic in how "prefs" is built up... e.g. look at the 7th item in the list of places it tried.  and I see for win32, the expectation is you only need to look in C:\python*, though that is no longer the default location for Python 3 since 3.5.  this should get some cleanup, so I'd say there's plenty of justification for filing an issue.


-- 
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