[Biopython (old issues only) - Bug #3004] PSL alignment format parsing

[email protected] Wed, 09 Nov 2016 05:04:26 +0000
Newsgroups gmane.comp.python.bio.devel
Message-ID <redmine.journal-15337.20161109050426.6a43e0ebed5508c1@redmine.open-bio.org>
Issue #3004 has been updated by Vincent Davis.


parsing PSL is available in current biopython. This should be closed.

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Bug #3004: PSL alignment format parsing
https://redmine.open-bio.org/issues/3004#change-15337

* Author: Vince Forgetta
* Status: New
* Priority: Normal
* Assignee: Biopython Dev Mailing List
* Category: Main Distribution
* Target version: Not Applicable
* URL: 
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Hi Bio-pythonistas,

I am interested in contributing code to biopython. I have developed a class to represent PSL output from the BLAT alignment program. I would like to contribute it to the AlignIO module. I have read through and agree to the guidelines stipulated on http://biopython.org/wiki/Contributing. I have never written unit tests before, but I am willing to learn.

Thanks.

Vince



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