[Biopython (old issues only) - Bug #2698] (Resolved) Attempt at a unit test for MaxEntrophy
[email protected] Wed, 09 Nov 2016 10:01:33 +0000
| Newsgroups | gmane.comp.python.bio.devel |
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| Message-ID | <redmine.journal-15341.20161109100132.c5b56e00f09c3f3d@redmine.open-bio.org> |
Issue #2698 has been updated by Peter Cock. Description updated Status changed from New to Resolved % Done changed from 0 to 100 OK, marking as resolved. Thanks all. ---------------------------------------- Bug #2698: Attempt at a unit test for MaxEntrophy https://redmine.open-bio.org/issues/2698#change-15341 * Author: Bruce Southey * Status: Resolved * Priority: Normal * Assignee: Biopython Dev Mailing List * Category: Unit Tests * Target version: Not Applicable * URL: ---------------------------------------- I used test_LogisticRegression.py to develop a test for MaxEntrophy. However, I could not get MaxEntrophy to train on that dataset. Indeed I have found it to be very sensitive to both data and functions making it extremely hard to develop bioinformatics-based data and associated test. So in the end I generated data based on some of my work. I trained the model outside the tests because I do not know how to avoid retraining the model for each test. ---Files-------------------------------- test_MaxEntrophy.py (3.28 KB) -- You have received this notification because you have either subscribed to it, or are involved in it. To change your notification preferences, please click here and login: http://redmine.open-bio.org _______________________________________________ Biopython-dev mailing list [email protected] http://mailman.open-bio.org/mailman/listinfo/biopython-dev