[Biopython (old issues only) - Bug #2670] (Closed) Populate seqfeature.display_name
[email protected] Mon, 14 Nov 2016 23:49:16 +0000
| Newsgroups | gmane.comp.python.bio.devel |
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| Message-ID | <redmine.journal-15379.20161114234916.1f88685e01072f40@redmine.open-bio.org> |
Issue #2670 has been updated by Vincent Davis. Description updated Status changed from New to Closed Assignee changed from Biopython Dev Mailing List to Vincent Davis % Done changed from 0 to 100 Looks like this has never been done. moved to github. ---------------------------------------- Bug #2670: Populate seqfeature.display_name https://redmine.open-bio.org/issues/2670#change-15379 * Author: Peter Cock * Status: Closed * Priority: Normal * Assignee: Vincent Davis * Category: BioSQL * Target version: Not Applicable * URL: ---------------------------------------- The seqfeature table has a display_name text field, currently left blank by Biopython's loader, but is populated by BioPerl. This field is used in GBrowse for example: http://gmod.org/wiki/GBrowse We could use the protein_id, locus_tag, etc depending on what annotation is available (ideally use the same as BioPerl). -- You have received this notification because you have either subscribed to it, or are involved in it. To change your notification preferences, please click here and login: http://redmine.open-bio.org _______________________________________________ Biopython-dev mailing list [email protected] http://mailman.open-bio.org/mailman/listinfo/biopython-dev