Re: Proposal for GSoC 2017
Sourav Singh <[email protected]> Thu, 2 Mar 2017 18:55:58 +0530
| Newsgroups | gmane.comp.python.bio.devel |
|---|---|
| Message-ID | <CALpy4pqns2QcQRJrqGaS0R_95uLCGqVS6hb9e4aX+C9MMJ00PA@mail.gmail.com> |
Respected Sir, Thanks for the mail! Regarding the part about NumPy support for PyPy, I had heard that like two years ago. So I am not sure if things have changed in terms of NumPy's support for PyPy. As for specific modules, I am also thinking of Bio.Statistics.lowess, Bio.HMM, Bio.SVDSuperimposer among many others. My main criteria for choosing the module for Numba is- 1) The modules which could be necessary for LLVM speedups like Bio.HMM 2) The modules which can demonstrate a significant speedup using Numba. Regards, Sourav _______________________________________________ Biopython-dev mailing list [email protected] http://mailman.open-bio.org/mailman/listinfo/biopython-dev