Re: Deprecating Bio.PDB.Dice
Peter Cock <[email protected]> Tue, 25 Apr 2017 17:40:29 +0100
| Newsgroups | gmane.comp.python.bio.devel |
|---|---|
| Message-ID | <CAKVJ-_423zUr-LnV6pX0s-tWCohhGrs=nKbb+Z_Z25oiFVvFFA@mail.gmail.com> |
Applied to master. Peter On Tue, Apr 18, 2017 at 1:36 PM, Peter Cock <[email protected]> wrote: > Pull request to do this is here: > > https://github.com/biopython/biopython/pull/1166 > > Issue to reuse the code is here: > > https://github.com/biopython/biopython/issues/1167 > > On Tue, Apr 18, 2017 at 1:29 PM, Peter Cock <[email protected]> wrote: >> Hello all, >> >> This came up in discussion on GitHub issue #820 [*] about turning >> existing self-tests into proper unit tests for user under TravisCI etc. >> >> Bio/PDB/Dice.py is essentially an example of how to write your >> own selector for use with PDBIO to write a subset of a PDB file. >> >> We are proposing to formally deprecate Bio.PDB.Dice (and later >> remove it [**]), and ideally reuse this as an example script and/or >> test case. >> >> If anyone is using the Dice module, please let us know. >> >> Thank you, >> >> Peter >> >> [*] https://github.com/biopython/biopython/issues/820 >> [**] http://biopython.org/wiki/Deprecation_policy