Ideas for Biopython 2.0

Dear Biopython developers and users,

Biopython exists now for more than one decade and with time age-related 
ailments sneaked into the code: A lot of different modules accumulated 
in the top level package, some of them not maintained for more than 5 
years; the module naming and documentation style is inconsistent; a lot 
of code is not optimized for modern (scientific) Python.

In the attached PDF I present my idea of an endeavor for Biopython 
modernisation. I would be glad to receive feedback and further 
suggestions from you.

Best regards,

Patrick Kunzmann

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