Deprecating Bio.GA (Genetic Algorithms)?
Peter Cock <[email protected]> Thu, 22 Jun 2017 17:14:27 +0100
| Newsgroups | gmane.comp.python.bio.devel |
|---|---|
| Message-ID | <CAKVJ-_5cErY9H_AQoi2nFxLR_TO8hP0CzoWKk5Z-taPxyYuLAg@mail.gmail.com> |
Hello all, Does anyone know what would be the most appropriate Python Genetic Algorithms package we could recommend as part of deprecating the Bio.GA module? How about Distributed Evolutionary Algorithms in Python (DEAP)? https://pypi.python.org/pypi/deap There are a few others mentioned here: https://stackoverflow.com/questions/16739118/genetic-algorithms-and-multi-objectives-optimization-on-python-libraries-tools Peter On Wed, Jun 7, 2017 at 3:11 PM, Brad Chapman <[email protected]> wrote: > > Peter; > Definitely, the genetic algorithms code is in the same place. If we wanted to > remove/deprecate it and point at something else that would be totally fine, > Brad > >> [ text/plain ] >> Thanks Brad, >> >> Does the same apply to Bio.GA which dates from the same time? >> i.e. You wrote the original genetic algorithms code in 2001, but >> other than cross-over code from Dan Vogel in 2002, it has only >> received maintenance updates like style changes and fixes for >> Python 3 compatibility. >> >> Peter >> >> On Wed, Jun 7, 2017 at 1:33 PM, Brad Chapman <[email protected]> wrote: >>> >>> Adil and Peter; >>> Thanks for looking at the NeuralNetwork code. I did write this and used it for >>> a project back then, but I'm sure it is completely out of date with best >>> practices and there are better libraries to use. >>> >>> I'd be happy to if y'all wanted to deprecate/remove it and suggest or build >>> off an alternative implementation that is more up to date. Thanks again, >>> Brad >>>