Re: [Biopython] saving multiple pdb files to the same output pdb file
Fomightez <[email protected]>
| Newsgroups | gmane.comp.python.bio.general |
|---|---|
| Message-ID | <CALki0=3n-j4DR9sxq74fTY5-fu8FtTAUkGKFg95fNp2yjzG5tg@mail.gmail.com> |
Because I don't have time at the moment to test my old code and update to Python 3, I contacted Artemi off list and pointed him at the script `merge_multi_PDBs_into_single_file.py` described and available at https://github.com/fomightez/structurework/tree/master/python_scripts . I developed it based on discussions by Claudia Millán Nebot , Hongbo Zhu, and Joso Rodrigues on the user's list in 2015. Claudia Millán Nebot was nice enough to let me use her function at the core. Noting it here as well in case it helps anyone. I'll try to test it in Python 3 (and do any necessary updating) and add a Binderized Jupyter notebook demo there too soon. (In case, some folks don't know about the Binder system yet, you can see an example in action at https://github.com/fomightez/patmatch-binder . Just go there and click on the `launch binder` badge.) -Wayne _______________________________________________ Biopython mailing list - [email protected] http://mailman.open-bio.org/mailman/listinfo/biopython