Re: [Biopython] GFF3 manipulation
Adam Sjøgren <[email protected]>
| Newsgroups | gmane.comp.python.bio.general |
|---|---|
| Organization | koldfront - analysis & revolution, Copenhagen, Denmark |
| Message-ID | <[email protected]> |
Mic writes:
> out_file = "/Users/lorencm/tmp/Gmp_NbV1_Final.gff3.bak"
...
> with open(out_file, "w") as out_handle:
...
> out_file.write([rec])
...
> File "test.py", line 19, in <module>
> out_file.write([rec])AttributeError: 'str' object has no attribute
> 'write'*
...
> What did I miss?
'out_file' is a string that contains a file name.
What the error tells you is that you called a method ".write()" on that
string, but strings don't have a method called that.
You need to call ".write()" on the file handle, 'out_handle', instead.
Best regards,
Adam
--
"Everything needs to change. Adam Sjøgren
And it has to start today." [email protected]
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