Re: [Biopython] [PATCH] Use https:// instead of git:// in examples

Markus writes:

>>      /home/adsj/work/biopython/Bio/__init__.py:128: BiopythonWarning:
>>        You may be importing Biopython from inside the source tree.
>>        [...]

> The warning is mostly intended for end user who didn't properly
> installed their Biopython. As a developer you need to get used to
> it...

Yup, I was ignoring it, but then the "_aligners" thing popped up:

>>        File "/home/adsj/work/biopython/Bio/Align/__init__.py", line 22, in <module>
>>          from Bio.Align import _aligners
>>      ImportError: cannot import name '_aligners'

> Actually, the top-level import of _aligners, which should be a
> compiled C extension, is indeed a pain. We have this since a few
> versions and it makes testing of many modules, which actually do not
> use _aligners, more complicated. To get rid of it you need to compile
> Biopython.

I did run "python setup.py build" and "python setup.py test" in my clone
of the repository, but I still get the error above.

Maybe I need to set more than just PYTHONPATH?


  Best regards,

    Adam

-- 
 "Since it is completely undocumented, your faith that        Adam Sjøgren
  it will stick around until they invent v4 is           [email protected]
  charmingly quaint."

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