[Biopython] NCBI TinySeq XML support - testing please?
Peter Cock <[email protected]>
| Newsgroups | gmane.comp.python.bio.general |
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| Message-ID | <CAKVJ-_5pUU5opX4gU_V6Npx51ZcBLcTLMb4k4LqWZRX7tgBWkw@mail.gmail.com> |
Hello Biopythoneers, Does anyone on the list use or has used the NCBI TinySeq XML format? Could you give this new parser for Bio.SeqIO a little test please? https://github.com/biopython/biopython/pull/2275 This is quite a lightweight XML file, the main benefit over FASTA format is it has an explicit field for the organism name (which is why I wanted to use this when downloading sequences from the NCBI). Thanks, Peter _______________________________________________ Biopython mailing list - [email protected] https://mailman.open-bio.org/mailman/listinfo/biopython