Re: [Biopython] EMBL DNA records with locations referencing other sequences
Peter Cock <[email protected]> Fri, 8 Nov 2019 16:58:16 +0000
| Newsgroups | gmane.comp.python.bio.general |
|---|---|
| Message-ID | <CAKVJ-_6bk3jB3yMQetkKFf-q7bHNTAzKtWNGa9N_YD1-=3r8oA@mail.gmail.com> |
Pull request done: https://github.com/biopython/biopython/pull/2334 Do you happen to have a good biologically interesting example which would be good for the documentation? The ones on issue 808 are complicated by the fact the annotated protein sequence does not match the conceptual translation (RNA editing etc). https://github.com/biopython/biopython/issues/808 Peter On Thu, Nov 7, 2019 at 6:41 PM Adam Sjøgren <[email protected]> wrote: > > Peter writes: > > > Having a look at this now - one minor style point on the tests, you could > > use assertRaisesRegexp here (aka assertRaisesRegex in modern Python): > > > > https://github.com/biopython/biopython/issues/2273 > > Thanks for the pointer - I think I just aped after another test. > > > Do you have any objection to me putting this up as a branch on my GitHub > > fork, adding some tweaks, and turning it into a pull request? > > Please do, no objections from me - I'm a beginner in Python, so the more > you improve it, the happer I am; thanks! > > > Best regards, > > Adam > > -- > "Please don't "meh" the panopticon. You are Adam Sjøgren > not making things better by doing that." [email protected] > > _______________________________________________ > Biopython mailing list - [email protected] > https://mailman.open-bio.org/mailman/listinfo/biopython _______________________________________________ Biopython mailing list - [email protected] https://mailman.open-bio.org/mailman/listinfo/biopython