Re: [Biopython] Volunteers for making Biopython release 1.77

Sounds good Chris,

Let's start with putting together a list of any blocking issues or pull
requests. Community suggestions are welcome too, that's why we're
discussing it openly on the mailing list.

Also to all our regular contributors - please say now if have something
nearly ready which you are hoping to get included.

Thanks all,

Peter

On Thu, May 7, 2020 at 2:56 PM Daley, Christopher <[email protected]>
wrote:

> Hi Peter,
> Yes, that's me. I've been wanting to contribute more but this year hasn't
> exactly gone to plan...
> I'm happy to start today and go through the issues and pull requests and
> we can set up a workflow that you feel is the most manageable.
> Cheers
> Chris
>
> ------------------------------
> *From:* Peter Cock <[email protected]>
> *Sent:* Wednesday, May 6, 2020 8:40 AM
> *To:* Daley, Christopher <[email protected]>
> *Cc:* Michiel de Hoon <[email protected]>; [email protected] <
> [email protected]>
> *Subject:* Re: [Biopython] Volunteers for making Biopython release 1.77
>
> Hi Christopher, is this you on GitHub with one pull request to Biopython
> already?
>
> https://github.com/chebizarro
> <https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fchebizarro&data=02%7C01%7Cdalchr28%40evergreen.edu%7C19fff98a94fd48ec146808d7f1d3c80e%7C22adcff7c06f49a68f2050711c40ddaa%7C0%7C0%7C637243764213082843&sdata=l4wghnNFxk03ZR6a9MgIJXhPEINA0rC%2BEI8Cj5aX634%3D&reserved=0>
> https://github.com/biopython/biopython/pull/2349
> <https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fbiopython%2Fbiopython%2Fpull%2F2349&data=02%7C01%7Cdalchr28%40evergreen.edu%7C19fff98a94fd48ec146808d7f1d3c80e%7C22adcff7c06f49a68f2050711c40ddaa%7C0%7C0%7C637243764213082843&sdata=T%2BRqIl7u6RJE0mOyBt38tv0Xz67A2L0y0DsbqK%2BQrLM%3D&reserved=0>
>
> Some of the release steps need accounts or write permissions, but we could
> do most of it via pull requests so that doesn't stop you taking a very
> active role.
>
> First is working out what if any blocking issues remain to be addressed
> before calling a commit freeze and doing the release. Do you have any
> thoughts on this? Even additional eyes on the open issues and pull requests
> would be helpful there.
>
> Thank you,
>
> Peter
>
> On Wed, May 6, 2020 at 3:37 PM Daley, Christopher <[email protected]>
> wrote:
>
> I missed the original message due to aggressive spam filtering by our IT
> dept.
> I'd be very much interested in managing a release, especially now the mid
> quarter rush is over. I've looked at the process and can pretty much get
> started straight away.
> Chris Daley
>
> Sent from my Verizon, Samsung Galaxy smartphone
>
> ------------------------------
> *From:* Biopython <biopython-bounces+dalchr28=
> [email protected]> on behalf of Peter Cock <
> [email protected]>
> *Sent:* Wednesday, May 6, 2020 7:11:32 AM
> *To:* Michiel de Hoon <[email protected]>
> *Cc:* [email protected] <[email protected]>
> *Subject:* Re: [Biopython] Volunteers for making Biopython release 1.77
>
> Perhaps I will have to do it again? Anyway - are there any open issues you
> all think need to be fixed before the release? My initial thoughts are just
> these two:
>
> NCBI BLAST v2.10.0 updates with arguments and DB changes:
> https://github.com/biopython/biopython/issues/2863
> <https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fbiopython%2Fbiopython%2Fissues%2F2863&data=02%7C01%7Cdalchr28%40evergreen.edu%7C19fff98a94fd48ec146808d7f1d3c80e%7C22adcff7c06f49a68f2050711c40ddaa%7C0%7C0%7C637243764213092841&sdata=lQfFkK9F9P%2B2k%2Bb89gahILSNx7guZXqU6kBHghsXZjs%3D&reserved=0>
>
> UniProt release 2019_11 changes FT and CC lines
> https://github.com/biopython/biopython/issues/2417
> <https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fbiopython%2Fbiopython%2Fissues%2F2417&data=02%7C01%7Cdalchr28%40evergreen.edu%7C19fff98a94fd48ec146808d7f1d3c80e%7C22adcff7c06f49a68f2050711c40ddaa%7C0%7C0%7C637243764213092841&sdata=aVj2i5yONk%2B3NX2b48X3GPJFktnkEtSbYwb0q%2BEa%2BEg%3D&reserved=0>
> (might be resolved already, need triage)
>
> Peter
>
>
>

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