Re: [Biopython] dblp searches

Oh, I didn't realize bioinformatics would be indexed there.

A libgen or scihub API would be great, though I doubt they exist. I'd guess
they'd be looked down upon anyway, for various moral or legal reasons.

I use Google Scholar for my literature searching, would never have thought
to use BioPython before seeing this thread!

On Fri, Mar 4, 2022, 8:12 AM Iddo Friedberg <[email protected]> wrote:

> Well, we have a full interface to Pubmed, so I thought a DBLP search
> (which catalogs many bioinformatics papers)  might nicely complement that.
>
> On Fri, Mar 4, 2022 at 10:09 AM Nathan McCorkle <[email protected]> wrote:
>
>> I'm not sure how DBLP is applicable to BioPython...
>>
>> On Wed, Feb 9, 2022 at 6:16 AM Peter Cock <[email protected]>
>> wrote:
>>
>>> Hi Iddo,
>>>
>>> 1) I don't know.
>>> 2) I am not a lawyer, but I think that would be OK if it is just plain
>>> MIT license. i.e.  incorporate the file with its own licensing header and
>>> copyright statement. I suspect we have/had precedent already, but a quick
>>> search on GitHub didn't find it.
>>>
>>> Peter
>>>
>>> On Tue, Feb 8, 2022 at 10:55 PM Iddo Friedberg <[email protected]> wrote:
>>>
>>>> Dear all,
>>>>
>>>> Not sure how much interest this has, but there is a Python wrapper for
>>>> the dblp api. I forked it, added functionality, and converted to Python 3.
>>>> The original github repository does not have a license, but the steup.py
>>>> lists MIT as the license.
>>>>
>>>> 1) Is there any interest in incorporating this into Biopython? It is
>>>> essentially complementary to the pubmed search tool, for publications not
>>>> indexed in Pubmed but indexed in DBLP.
>>>>
>>>> 2) If so, do we have a licensing issue?
>>>>
>>>> The DBLP API: https://dblp.org/faq/How+to+use+the+dblp+search+API.html
>>>>
>>>> Code (my fork with the added stuff):
>>>> https://github.com/idoerg/dblp-python
>>>>
>>>> Original repo: https://github.com/scholrly/dblp-python
>>>>
>>>> Iddo
>>>>
>>>> --
>>>> Iddo Friedberg
>>>> http://iddo-friedberg.net/contact.html
>>>> ++++++++++[>+++>++++++>++++++++>++++++++++>+++++++++++<<<<<-]>>>>++++.>
>>>> ++++++..----.<<<<++++++++++++++++++++++++++++.-----------..>>>+.-----.
>>>> .>-.<<<<--.>>>++.>+++.<+++.----.-.<++++++++++++++++++.>+.>.<++.<<<+.>>
>>>> >>----.<--.>++++++.<<<<------------------------------------.
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>>
>>
>> --
>> -Nathan
>>
>
>
> --
> Iddo Friedberg
> http://iddo-friedberg.net/contact.html
> ++++++++++[>+++>++++++>++++++++>++++++++++>+++++++++++<<<<<-]>>>>++++.>
> ++++++..----.<<<<++++++++++++++++++++++++++++.-----------..>>>+.-----.
> .>-.<<<<--.>>>++.>+++.<+++.----.-.<++++++++++++++++++.>+.>.<++.<<<+.>>
> >>----.<--.>++++++.<<<<------------------------------------.
>

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