[Biopython] Biopython and AI PRs, Fwd: Current policy on AI-generated code in NumPy

Peter Cock <[email protected]> Wed, 4 Mar 2026 16:26:39 +0000
Newsgroups gmane.comp.python.bio.general
Message-ID <CAKVJ-_5D05d-F=sQ0qQPKf98_OJr=sL6FmMCw8U25EQ_tCUGBg@mail.gmail.com>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