[pysqlite] unusual memory behavior

Michael Bayer <[email protected]> Wed, 27 May 2009 12:51:02 -0400
Newsgroups gmane.comp.python.db.pysqlite.user
Message-ID <[email protected]>
This is not necessarily a "bug", but this behavior became apparent  
through the SQLAlchemy unit tests.  We have a series of tests that  
attempt to detect memory leaks by running a block of code repeatedly,  
performing a gc.collect() and then comparing the count of objects in  
gc.get_objects() over time.   We consider a memory leak to be when the  
number of objects grows steadily for 30-40 iterations in a row with no  
dips.

So with the latest pysqlite 2.5.5 built statically on an intel mac  
against sqlite 3.6.14, we get a steadily growing behavior that grows  
for about 250 iterations before dipping back down.  Its a little  
strange and it means we'll eventually have to disable that test for  
pysqlite, once the current versions find their way into the python  
distribution.   The good news is that all SQLalchemy unit tests  
besides this one do pass on this pysqlite build.

an illustration is as follows:

from pysqlite2 import dbapi2 as dbapi
import gc
conn = dbapi.connect(':memory:')

def execute(stmt):
     cursor = conn.cursor()
     cursor.execute(stmt)
     return cursor

execute("""
CREATE TABLE table1 (
	id INTEGER NOT NULL,
	data VARCHAR(30),
	PRIMARY KEY (id)
)
""")

counts = []
for i in xrange(1000):
     ret = execute("""SELECT table1.id AS table1_id, table1.data AS  
table1_data FROM table1""")
     conn.rollback()
     gc.collect()
     num_objects = len(gc.get_objects())
     if counts and num_objects < counts[-1]:
         print "growing counts:", ",".join("%d" % c for c in counts),  
"\n"
         counts = []
     counts.append(num_objects)



on my mac I get these results:

growing counts:  
4087,4088,4089,4090,4091,4092,4093,4094,4095,4096,4097,4098,4099,4100,41 
01,4102,4103,4104,4105,4106,4107,4108,4109,4110,4111,4112,4113,4114,4115,4116,4117,4118,4119,4120,4121,4122,4123,4124,4125,4126,4127,4128,4129,4130,4131,4132,4133,4134,4135,4136,4137,4138,4139,4140,4141,4142,4143,4144,4145,4146,4147,4148,4149,4150,4151,4152,4153,4154,4155,4156,4157,4158,4159,4160,4161,4162,4163,4164,4165,4166,4167,4168,4169,4170,4171,4172,4173,4174,4175,4176,4177,4178,4179,4180,4181,4182,4183,4184,4185,4186,4187,4188,4189,4190,4191,4192,4193,4194,4195,4196,4197,4198,4199,4200,4201,4202,4203,4204,4205,4206,4207,4208,4209,4210,4211,4212,4213,4214,4215,4216,4217,4218,4219,4220,4221,4222,4223,4224,4225,4226,4227,4228,4229,4230,4231,4232,4233,4234,4235,4236,4237,4238,4239,4240,4241,4242,4243,4244,4245,4246,4247,4248,4249,4250,4251,4252,4253,4254,4255,4256,4257,4258,4259,4260,42
 61,4262,4263,4264,4265,4266,4267,4268,4269,4270,4271,4272,4273,4274,4275,4276,4277,4278,4279,4280,4281,4282,4283,4284,4285

growing counts:  
4087,4103,4104,4105,4106,4107,4108,4109,4110,4111,4112,4113,4114,4115,41 
16,4117,4118,4119,4120,4121,4122,4123,4124,4125,4126,4127,4128,4129,4130,4131,4132,4133,4134,4135,4136,4137,4138,4139,4140,4141,4142,4143,4144,4145,4146,4147,4148,4149,4150,4151,4152,4153,4154,4155,4156,4157,4158,4159,4160,4161,4162,4163,4164,4165,4166,4167,4168,4169,4170,4171,4172,4173,4174,4175,4176,4177,4178,4179,4180,4181,4182,4183,4184,4185,4186,4187,4188,4189,4190,4191,4192,4193,4194,4195,4196,4197,4198,4199,4200,4201,4202,4203,4204,4205,4206,4207,4208,4209,4210,4211,4212,4213,4214,4215,4216,4217,4218,4219,4220,4221,4222,4223,4224,4225,4226,4227,4228,4229,4230,4231,4232,4233,4234,4235,4236,4237,4238,4239,4240,4241,4242,4243,4244,4245,4246,4247,4248,4249,4250,4251,4252,4253,4254,4255,4256,4257,4258,4259,4260,4261,4262,4263,4264,4265,4266,4267,4268,4269,4270,4271,4272,4273,4274,4275,42
 76,4277,4278,4279,4280,4281,4282,4283,4284,4285,4286,4287,4288,4289,4290,4291,4292,4293,4294,4295,4296,4297,4298,4299,4300,4301,4302

growing counts:  
4102,4103,4104,4105,4106,4107,4108,4109,4110,4111,4112,4113,4114,4115,41 
16,4117,4118,4119,4120,4121,4122,4123,4124,4125,4126,4127,4128,4129,4130,4131,4132,4133,4134,4135,4136,4137,4138,4139,4140,4141,4142,4143,4144,4145,4146,4147,4148,4149,4150,4151,4152,4153,4154,4155,4156,4157,4158,4159,4160,4161,4162,4163,4164,4165,4166,4167,4168,4169,4170,4171,4172,4173,4174,4175,4176,4177,4178,4179,4180,4181,4182,4183,4184,4185,4186,4187,4188,4189,4190,4191,4192,4193,4194,4195,4196,4197,4198,4199,4200,4201,4202,4203,4204,4205,4206,4207,4208,4209,4210,4211,4212,4213,4214,4215,4216,4217,4218,4219,4220,4221,4222,4223,4224,4225,4226,4227,4228,4229,4230,4231,4232,4233,4234,4235,4236,4237,4238,4239,4240,4241,4242,4243,4244,4245,4246,4247,4248,4249,4250,4251,4252,4253,4254,4255,4256,4257,4258,4259,4260,4261,4262,4263,4264,4265,4266,4267,4268,4269,4270,4271,4272,4273,4274,4275,42
 76,4277,4278,4279,4280,4281,4282,4283,4284,4285,4286,4287,4288,4289,4290,4291,4292,4293,4294,4295,4296,4297,4298,4299,4300,4301,4302

growing counts:  
4102,4103,4104,4105,4106,4107,4108,4109,4110,4111,4112,4113,4114,4115,41 
16,4117,4118,4119,4120,4121,4122,4123,4124,4125,4126,4127,4128,4129,4130,4131,4132,4133,4134,4135,4136,4137,4138,4139,4140,4141,4142,4143,4144,4145,4146,4147,4148,4149,4150,4151,4152,4153,4154,4155,4156,4157,4158,4159,4160,4161,4162,4163,4164,4165,4166,4167,4168,4169,4170,4171,4172,4173,4174,4175,4176,4177,4178,4179,4180,4181,4182,4183,4184,4185,4186,4187,4188,4189,4190,4191,4192,4193,4194,4195,4196,4197,4198,4199,4200,4201,4202,4203,4204,4205,4206,4207,4208,4209,4210,4211,4212,4213,4214,4215,4216,4217,4218,4219,4220,4221,4222,4223,4224,4225,4226,4227,4228,4229,4230,4231,4232,4233,4234,4235,4236,4237,4238,4239,4240,4241,4242,4243,4244,4245,4246,4247,4248,4249,4250,4251,4252,4253,4254,4255,4256,4257,4258,4259,4260,4261,4262,4263,4264,4265,4266,4267,4268,4269,4270,4271,4272,4273,4274,4275,42
 76,4277,4278,4279,4280,4281,4282,4283,4284,4285,4286,4287,4288,4289,4290,4291,4292,4293,4294,4295,4296,4297,4298,4299,4300,4301,4302