Re: Fwd: Re: Use of "python" shebang an installation error?

Filipe Laíns <[email protected]> Tue, 21 Jul 2020 22:02:44 +0100

Newsgroups	gmane.comp.python.distutils.devel
Organization	Archlinux
Message-ID	<[email protected]>

On Tue, 2020-07-21 at 13:51 -0700, David Mathog wrote:
> (oops, had to resend, forgot to change the destination to
> <[email protected]>)
> 
> biopython-1.77, for instance, when installed into a virtualenv with
> pip3, has many of these shebangs:
> 
>    #!/usr/bin/env python
> 
> And they are all over the place.  They are:
> 
> ./site-packages/Bio/bgzf.py:
> ./site-packages/Bio/PDB/parse_pdb_header.py:
> ./site-packages/Bio/PDB/PDBList.py:
> ./site-packages/Bio/Restriction/__init__.py:
> ./site-packages/Bio/Restriction/Restriction.py:
> ./site-packages/Bio/Restriction/PrintFormat.py:
> ./site-packages/Bio/Restriction/Restriction_Dictionary.py:
> ./site-packages/Bio/Wise/__init__.py:
> ./site-packages/Bio/Wise/psw.py:
> ./site-packages/Bio/Wise/dnal.py:
> ./site-packages/Bio/UniProt/GOA.py:
> ./site-packages/Bio/SeqUtils/__init__.py:
> 
> Regards,
> 
> David Mathog
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Is it being installed as an egg or wheel? Can you check what happens
when you pass --use-pep517 to the pip install command (to force
installing as a wheel)?

Filipe Laíns

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