[f2py] f2py compiling issues on a Mac - Brand new user!

Brian Giera <[email protected]>
Newsgroups gmane.comp.python.f2py.user
Message-ID <[email protected]> 
The attached files are the file I'm trying to compile and the
corresponding error message.

I used the following command to compile: f2py --fcompiler=gnu95 -c -m
hello hello.f --verbose>output.txt

I am a beginning user and have never compiled any fortran code,
including this one.

Thanks,

Brian

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output.txt (text/plain, 14.3 KB) 
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
building extension "hello" sources
f2py options: []
f2py:> /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/hellomodule.c
creating /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck
creating /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5
Reading fortran codes...
	Reading file 'hello.f' (format:fix,strict)
Post-processing...
	Block: hello
			Block: foo
Post-processing (stage 2)...
Building modules...
	Building module "hello"...
		Constructing wrapper function "foo"...
		  foo(a)
	Wrote C/API module "hello" to file "/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/hellomodule.c"
  adding '/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/fortranobject.c' to sources.
  adding '/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5' to include_dirs.
copying /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy-1.4.0.dev6728-py2.5-macosx-10.3-i386.egg/numpy/f2py/src/fortranobject.c -> /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5
copying /Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy-1.4.0.dev6728-py2.5-macosx-10.3-i386.egg/numpy/f2py/src/fortranobject.h -> /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5
running build_ext
new_compiler returns distutils.unixccompiler.UnixCCompiler
customize UnixCCompiler
customize UnixCCompiler using build_ext
********************************************************************************
distutils.unixccompiler.UnixCCompiler
compiler_cxx  = ['g++']
ranlib        = ['ranlib']
linker_exe    = ['gcc']
compiler_so   = ['gcc', '-arch', 'ppc', '-arch', 'i386', '-isysroot', '/Developer/SDKs/MacOSX10.4u.sdk', '-fno-strict-aliasing', '-Wno-long-double', '-no-cpp-precomp', '-mno-fused-madd', '-fno-common', '-dynamic', '-DNDEBUG', '-g', '-O3']
archiver      = ['ar', '-cr']
preprocessor  = ['gcc', '-E']
linker_so     = ['gcc', '-arch', 'i386', '-arch', 'ppc', '-isysroot', '/Developer/SDKs/MacOSX10.4u.sdk', '-g', '-bundle', '-undefined', 'dynamic_lookup']
compiler      = ['gcc', '-arch', 'ppc', '-arch', 'i386', '-isysroot', '/Developer/SDKs/MacOSX10.4u.sdk', '-fno-strict-aliasing', '-Wno-long-double', '-no-cpp-precomp', '-mno-fused-madd', '-fno-common', '-dynamic', '-DNDEBUG', '-g', '-O3']
libraries     = []
library_dirs  = []
include_dirs  = ['/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5']
********************************************************************************
customize Gnu95FCompiler
find_executable('gfortran')
Found executable /usr/local/bin/gfortran
exec_command(['/usr/local/bin/gfortran', '--version'],)
Retaining cwd: /Users/bgiera
_preserve_environment([])
_update_environment(...)
_exec_command_posix(...)
Running os.system('( /usr/local/bin/gfortran --version ; echo $? > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/TYSBWo ) > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/ufHP0C 2>&1')
_update_environment(...)
exec_command(['/usr/local/bin/gfortran', '-Wall', '-fno-second-underscore', '-v', '-arch', 'i686'],)
Retaining cwd: /Users/bgiera
_preserve_environment([])
_update_environment(...)
_exec_command_posix(...)
Running os.system('( /usr/local/bin/gfortran -Wall -fno-second-underscore -v -arch i686 ; echo $? > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/Cejlrv ) > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/sOvK-L 2>&1')
_update_environment(...)
exec_command(['/usr/local/bin/gfortran', '-Wall', '-fno-second-underscore', '-fPIC', '-O3', '-funroll-loops', '-v', '-arch', 'i686'],)
Retaining cwd: /Users/bgiera
_preserve_environment([])
_update_environment(...)
_exec_command_posix(...)
Running os.system('( /usr/local/bin/gfortran -Wall -fno-second-underscore -fPIC -O3 -funroll-loops -v -arch i686 ; echo $? > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/ymGEOI ) > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/yIQAhJ 2>&1')
_update_environment(...)
exec_command(['/usr/local/bin/gfortran', '-Wall', '-ffixed-form', '-fno-second-underscore', '-fPIC', '-O3', '-funroll-loops', '-print-libgcc-file-name'],)
Retaining cwd: /Users/bgiera
_preserve_environment([])
_update_environment(...)
_exec_command_posix(...)
Running os.system('( /usr/local/bin/gfortran -Wall -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops -print-libgcc-file-name ; echo $? > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/ulyLc- ) > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/2cMtDO 2>&1')
_update_environment(...)
exec_command(['/usr/local/bin/gfortran', '-Wall', '-ffixed-form', '-fno-second-underscore', '-fPIC', '-O3', '-funroll-loops', '-print-libgcc-file-name'],)
Retaining cwd: /Users/bgiera
_preserve_environment([])
_update_environment(...)
_exec_command_posix(...)
Running os.system('( /usr/local/bin/gfortran -Wall -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops -print-libgcc-file-name ; echo $? > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/MfQl73 ) > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/CX67J1 2>&1')
_update_environment(...)
customize Gnu95FCompiler using build_ext
********************************************************************************
numpy.distutils.fcompiler.gnu.Gnu95FCompiler
compiler_f77    = ['/usr/local/bin/gfortran', '-Wall', '-ffixed-form', '-fno-second-underscore', '-fPIC', '-O3', '-funroll-loops']
compiler_fix    = ['/usr/local/bin/gfortran', '-Wall', '-ffixed-form', '-fno-second-underscore', '-Wall', '-fno-second-underscore', '-fPIC', '-O3', '-funroll-loops']
ranlib          = ['/usr/local/bin/gfortran']
linker_exe      = ['/usr/local/bin/gfortran', '-Wall', '-Wall']
archiver        = ['/usr/local/bin/gfortran', '-cr']
version_cmd     = ['/usr/local/bin/gfortran', '--version']
linker_so       = ['/usr/local/bin/gfortran', '-Wall', '-Wall', '-undefined', 'dynamic_lookup', '-bundle']
compiler_f90    = ['/usr/local/bin/gfortran', '-Wall', '-fno-second-underscore', '-fPIC', '-O3', '-funroll-loops']
version         = LooseVersion ('4.4.0')
libraries       = ['gfortran']
library_dirs    = ['/usr/local/gfortran/lib/gcc/powerpc-apple-darwin9.6.0/4.4.0']
object_switch   = '-o '
compile_switch  = '-c'
include_dirs    = ['/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5']
********************************************************************************
building 'hello' extension
compiling C sources
C compiler: gcc -arch ppc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -fno-strict-aliasing -Wno-long-double -no-cpp-precomp -mno-fused-madd -fno-common -dynamic -DNDEBUG -g -O3

creating /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/var
creating /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/var/folders
creating /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/var/folders/wu
creating /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI
creating /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-
creating /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck
creating /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5
compile options: '-I/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5 -I/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy-1.4.0.dev6728-py2.5-macosx-10.3-i386.egg/numpy/core/include -I/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -c'
gcc: /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/hellomodule.c
exec_command(['gcc', '-arch', 'ppc', '-arch', 'i386', '-isysroot', '/Developer/SDKs/MacOSX10.4u.sdk', '-fno-strict-aliasing', '-Wno-long-double', '-no-cpp-precomp', '-mno-fused-madd', '-fno-common', '-dynamic', '-DNDEBUG', '-g', '-O3', '-I/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5', '-I/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy-1.4.0.dev6728-py2.5-macosx-10.3-i386.egg/numpy/core/include', '-I/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5', '-c', '/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/hellomodule.c', '-o', '/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/hellomodule.o'],)
Retaining cwd: /Users/bgiera
_preserve_environment([])
_update_environment(...)
_exec_command_posix(...)
Running os.system('( gcc -arch ppc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -fno-strict-aliasing -Wno-long-double -no-cpp-precomp -mno-fused-madd -fno-common -dynamic -DNDEBUG -g -O3 -I/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5 -I/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy-1.4.0.dev6728-py2.5-macosx-10.3-i386.egg/numpy/core/include -I/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -c /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/hellomodule.c -o /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/hellomodule.o ; echo $? > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/AGfiDg ) 2>&1 | tee /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/JADyKf ')
_update_environment(...)
gcc: /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/fortranobject.c
exec_command(['gcc', '-arch', 'ppc', '-arch', 'i386', '-isysroot', '/Developer/SDKs/MacOSX10.4u.sdk', '-fno-strict-aliasing', '-Wno-long-double', '-no-cpp-precomp', '-mno-fused-madd', '-fno-common', '-dynamic', '-DNDEBUG', '-g', '-O3', '-I/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5', '-I/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy-1.4.0.dev6728-py2.5-macosx-10.3-i386.egg/numpy/core/include', '-I/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5', '-c', '/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/fortranobject.c', '-o', '/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/fortranobject.o'],)
Retaining cwd: /Users/bgiera
_preserve_environment([])
_update_environment(...)
_exec_command_posix(...)
Running os.system('( gcc -arch ppc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -fno-strict-aliasing -Wno-long-double -no-cpp-precomp -mno-fused-madd -fno-common -dynamic -DNDEBUG -g -O3 -I/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5 -I/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy-1.4.0.dev6728-py2.5-macosx-10.3-i386.egg/numpy/core/include -I/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -c /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/fortranobject.c -o /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5/fortranobject.o ; echo $? > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/kF-KLu ) 2>&1 | tee /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/FoVPYB ')
_update_environment(...)
compiling Fortran sources
Fortran f77 compiler: /usr/local/bin/gfortran -Wall -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops
Fortran f90 compiler: /usr/local/bin/gfortran -Wall -fno-second-underscore -fPIC -O3 -funroll-loops
Fortran fix compiler: /usr/local/bin/gfortran -Wall -ffixed-form -fno-second-underscore -Wall -fno-second-underscore -fPIC -O3 -funroll-loops
compile options: '-I/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5 -I/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy-1.4.0.dev6728-py2.5-macosx-10.3-i386.egg/numpy/core/include -I/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -c'
gfortran:f77: hello.f
exec_command(['/usr/local/bin/gfortran', '-Wall', '-ffixed-form', '-fno-second-underscore', '-fPIC', '-O3', '-funroll-loops', '-I/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5', '-I/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy-1.4.0.dev6728-py2.5-macosx-10.3-i386.egg/numpy/core/include', '-I/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5', '-c', '-c', 'hello.f', '-o', '/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/hello.o'],)
Retaining cwd: /Users/bgiera
_preserve_environment([])
_update_environment(...)
_exec_command_posix(...)
Running os.system('( /usr/local/bin/gfortran -Wall -ffixed-form -fno-second-underscore -fPIC -O3 -funroll-loops -I/var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/src.macosx-10.3-i386-2.5 -I/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/site-packages/numpy-1.4.0.dev6728-py2.5-macosx-10.3-i386.egg/numpy/core/include -I/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -c -c hello.f -o /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp7g5lck/hello.o ; echo $? > /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/OBFl7u ) 2>&1 | tee /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg/OBIBFz ')
<built-in>:0: internal compiler error: Illegal instruction
Please submit a full bug report,
with preprocessed source if appropriate.
See <http://gcc.gnu.org/bugs.html> for instructions.
_update_environment(...)
<built-in>:0: internal compiler error: Illegal instruction
Please submit a full bug report,
with preprocessed source if appropriate.
See <http://gcc.gnu.org/bugs.html> for instructions.
removing /var/folders/wu/wuRzoP9-FL4bXo8c+tbcTU+++TI/-Tmp-/tmp8ii-xg
hello.f (application/octet-stream, 122 B) - not displayed
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