change refuses to close

Aede says that a diff is not complete when in fact it is:

~/master.1.C043 aryeh@kirk% aegis -b && aegis -diff && aegis -de
aegis: Warning: You are seeing the short form of the error messages.  The
    message catalogues may not have been installed correctly, or you may
    need to check the settings of your LC_ALL and LANG environment
    variables.
aegis: cook -s -b 
/home/aegis/master/branch.1/baseline/src/build/cook/Howto.cook -nl? 
project=master.1
    change=43 version=1.C043 
search_path=/home/aryeh/master.1.C043:/home/aegis/master/branch.1/baseline:/
    home/aegis/master/baseline
Compiling obj/test/backend/util/net/http/TestHttpHeader.class
Compiling obj/test/backend/util/net/TestSocketWrapper.class
signedOn all built
aegis: Warning: You are seeing the short form of the error messages.  The
    message catalogues may not have been installed correctly, or you may
    need to check the settings of your LC_ALL and LANG environment
    variables.
aegis: project "master.1": change 43: 
src/backend/abstracts/AbstractsException.java,D not found
aegis: project "master.1": change 43: diff required
aegis: project "master.1": change 43: develop end fail
~/master.1.C043 aryeh@kirk% touch 
src/backend/abstracts/AbstractsException.java,D
~/master.1.C043 aryeh@kirk% !ae
aegis -b && aegis -diff && aegis -de
aegis: Warning: You are seeing the short form of the error messages.  The
    message catalogues may not have been installed correctly, or you may
    need to check the settings of your LC_ALL and LANG environment
    variables.
aegis: cook -s -b 
/home/aegis/master/branch.1/baseline/src/build/cook/Howto.cook -nl? 
project=master.1
    change=43 version=1.C043 
search_path=/home/aryeh/master.1.C043:/home/aegis/master/branch.1/baseline:/
    home/aegis/master/baseline
Compiling obj/test/backend/util/net/http/TestHttpHeader.class
Compiling obj/test/backend/util/net/TestSocketWrapper.class
signedOn all built
aegis: Warning: You are seeing the short form of the error messages.  The
    message catalogues may not have been installed correctly, or you may
    need to check the settings of your LC_ALL and LANG environment
    variables.
aegis: project "master.1": change 43: 
src/backend/abstracts/AbstractsException.java,D changed after diff
aegis: project "master.1": change 43: develop end fail
~/master.1.C043 aryeh@kirk% aelcf
src/backend/abstracts/AbstractsException.java
src/backend/abstracts/AbstractsNullException.java
src/backend/abstracts/Nulls.java
src/backend/adt/coord/CoordinatedCollection.java
src/backend/adt/graph/Edge.java
src/backend/adt/graph/GraphNode.java
src/backend/adt/graph/GraphNodeEdgeSet.java
src/backend/adt/graph/weight/WeightWrapperDirected.java
src/backend/adt/graph/weight/WeightWrapperField.java
src/backend/adt/graph/weight/WeightWrapperUndirected.java
src/backend/adt/tree/SimpleTreeNode.java
src/backend/adt/tree/SimpleTreeWalkNode.java
src/backend/adt/tree/SingleTypeTreeNode.java
src/backend/adt/tree/TreeNodeFinder.java
src/backend/adt/util/Pair.java
src/backend/adt/vlist/ValidatedList.java
src/backend/apps/admin/Developer.java
src/backend/apps/admin/Host.java
src/backend/apps/content/PageData.java
src/backend/apps/editor/Widget.java
src/backend/apps/social/Contact.java
src/backend/apps/social/ContactList.java
src/backend/apps/social/messaging/MessageTreeNode.java
src/backend/are/enforce/dv/DefaultValuedRuleEnforcer.java
src/backend/are/rule/decomp/IterableRuleView.java
src/backend/are/rule/unit/atom/AtomicRuleSpecifier.java
src/backend/are/rule/unit/atom/DiscreteTotalOrderWrapperIterator.java
src/backend/are/rule/unit/atom/LimitValueView.java
src/backend/langs/json/JSONSimpleElement.java
src/backend/langs/xml/XMLAttribute.java
src/backend/langs/xml/parse/StartTagToken.java
src/backend/util/UtilException.java
src/backend/util/state/MappedFiniteStateMapLink.java
src/backend/util/state/PairMappedFiniteStateMapLink.java
src/backend/util/state/PairedStateTransitionMap.java
src/backend/util/state/StateTransitionMap.java
src/backend/util/state/TransitionMap.java
src/lang/parse/Token.java
src/test/backend/TestAll.java
src/test/backend/abstracts/TestAll.java
src/test/backend/abstracts/TestNulls.java
src/test/backend/util/TestAll.java
test/00/t0004a.sh
testresults