Build root update caused dependency problems

/opt/arkbuild-client/bin/do-updbuildroot: line 27: /bin/rpm: Argument list too long
error: "kernel-drivers-old-ide-2.6.18-0.rc6.2ark" specifies multiple packages
error: "kernel-drivers-old-ide-2.6.18-1ark" specifies multiple packages
error: "kernel-drivers-old-ide-smp-2.6.18-1ark" specifies multiple packages
error: "kernel-filesystem-jfs-2.6.18-0.rc6.2ark" specifies multiple packages
error: "kernel-filesystem-jfs-2.6.18-1ark" specifies multiple packages
error: "kernel-filesystem-jfs-2.6.18-2ark" specifies multiple packages
error: "kernel-filesystem-jfs-smp-2.6.18-1ark" specifies multiple packages
error: Failed dependencies:
	libgcj = 4.3.0-0.129413.1ark is needed by (installed) gcc-java-awt-4.3.0-0.129413.1ark.i586
error: Failed dependencies:
	libgcj4 is needed by (installed) devel-java-1.0-1ark.noarch
	libgcj-tools.so.9 is needed by (installed) gcc-java-4.3.0-0.129413.1ark.i586
	libgcj-tools.so.9 is needed by (installed) gcc-java-awt-4.3.0-0.129413.1ark.i586
	libgcj.so.9 is needed by (installed) gcc-java-4.3.0-0.129413.1ark.i586
	libgcj.so.9 is needed by (installed) gcc-java-awt-4.3.0-0.129413.1ark.i586
	libgcj_bc.so.1 is needed by (installed) wsdl4j-precompiled-1.5.2-3ark.i586
	libgcj_bc.so.1 is needed by (installed) commons-pool-precompiled-1.3-2ark.i586
	libgcj_bc.so.1 is needed by (installed) commons-collections-precompiled-3.2-2ark.i586
	libgcj_bc.so.1 is needed by (installed) commons-daemon-precompiled-1.0.1-2ark.i586
	libgcj_bc.so.1 is needed by (installed) activation-precompiled-1.1.1-0.20060819.1ark.i586
	libgcj_bc.so.1 is needed by (installed) java-getopt-precompiled-1.0.12-2ark.i586
	libgcj_bc.so.1 is needed by (installed) jakarta-regexp-precompiled-1.4-2ark.i586
	libgcj_bc.so.1 is needed by (installed) javamail-precompiled-1.4-0.20060819.1ark.i586
	libgcj_bc.so.1 is needed by (installed) avalon-logkit-precompiled-1.2-3ark.i586
	libgcj_bc.so.1 is needed by (installed) jessie-precompiled-1.0.1-2ark.i586
	libgcj_bc.so.1 is needed by (installed) commons-codec-precompiled-1.3-3ark.i586
	libgcj_bc.so.1 is needed by (installed) xml-commons-precompiled-1.0-0.b2.5ark.i586
	libgcj_bc.so.1 is needed by (installed) inetlib-precompiled-1.1.2-0.20060819.1ark.i586
	libgcj_bc.so.1 is needed by (installed) avalon-framework-precompiled-4.2.0-2ark.i586
	libgcj_bc.so.1 is needed by (installed) bcel-precompiled-5.2-1ark.i586
	libgcj_bc.so.1 is needed by (installed) servletapi-precompiled-5.0-1.428048.1ark.i586
	libgcj_bc.so.1 is needed by (installed) xalan-j-precompiled-2.7.0-3ark.i586
	libgcj_bc.so.1 is needed by (installed) gnu-crypto-precompiled-2.1.0-1ark.i586
	libgcj_bc.so.1 is needed by (installed) bsf-precompiled-2.3.0-2ark.i586
	libgcj_bc.so.1 is needed by (installed) xerces-j-precompiled-2.8.0-1ark.i586
	libgcj_bc.so.1 is needed by (installed) postgresql-jdbc-precompiled-8.2.503-1ark.i586
	libgcj_bc.so.1 is needed by (installed) ant-precompiled-1.7.0-1ark.i586
	libgcj_bc.so.1 is needed by (installed) db4-java-4.5.20-2ark.i586
	libgcj_bc.so.1 is needed by (installed) jakarta-oro-precompiled-2.0.8-3ark.i586
	libgcj_bc.so.1 is needed by (installed) junit-precompiled-3.8.2-2ark.i586
	libgcj_bc.so.1 is needed by (installed) log4j-precompiled-1.2.14-1ark.i586
	libgcj_bc.so.1 is needed by (installed) xt-precompiled-20051206-2ark.i586
	libgcj_bc.so.1 is needed by (installed) gcc-java-4.3.0-0.129413.1ark.i586
	libgcj is needed by (installed) pdftk-1.12-1ark.i586
	libgcj = 4.3.0-0.129413.1ark is needed by (installed) gcc-java-awt-4.3.0-0.129413.1ark.i586
error: "libXft-2.1.11-1ark" specifies multiple packages
error: "libXft-devel-2.1.11-1ark" specifies multiple packages
error: "qt4-demos-debug-4.2.0-0.583195.1ark" specifies multiple packages
error: can't create transaction lock on /build/arklinux
error: Failed dependencies:
	libgcj is needed by ecj-3.2-0.20060819.1ark.i586
	libgcj.so.8 is needed by ecj-3.2-0.20060819.1ark.i586
error: can't create transaction lock on /build/arklinux
Preparing...                ##################################################
libgcj                      ##################################################
error: unpacking of archive failed on file /usr/lib/gcj-4.3.0: cpio: rename failed - Inappropriate ioctl for device
error: can't create transaction lock on /build/arklinux
Preparing...                ##################################################
openoffice-help-Xhosa       ##################################################
error: unpacking of archive failed on file /usr/lib/ooo-2.2/help/xh/smath.ht;471889c3: cpio: read failed - Inappropriate ioctl for device
error: can't create transaction lock on /build/arklinux
Preparing...                ##################################################
wesnoth                     ##################################################
error: unpacking of archive failed on file /usr/share/wesnoth/data/campaigns/Sceptre_of_Fire/scenarios/5_Hills_of_the_Shorbear_Clan.cfg;471889ca: cpio: read failed - Inappropriate ioctl for device
error: can't create transaction lock on /build/arklinux
Preparing...                ##################################################
xkeyboard-config            ##################################################
error: unpacking of archive failed on file /usr/share/X11/xkb/symbols/pc: cpio: rename failed - Inappropriate ioctl for device