Re: rexecv, ssh, nohup, reop_export_path
Jack de Valpine <[email protected]>
| Newsgroups | gmane.linux.cluster.ssic.user |
|---|---|
| Message-ID | <[email protected]> |
Hi,
Ok, I think that I may have come up with at least one work around for
this myself. I did a search for ssh, background jobs and hanging on exit
and came up with a couple of solutions. The one that seems simplest is
to wrap the whole call in a shell call:
sh -c "nohup my_program &"
Then it is possible to exit cleanly without hangup and tests that I have
run continue to completion on all nodes.
To confirm this I have also watched top in a seperate ssh session. Some
other possible solutions are as follows, though not really tested:
* redirect stdin - nohup my_program </dev/null & - I did do a
partial test on this and it appears to work however by redirecting
stdin I think behavior of nohup is effected as it no longer
generates nohup.out
* use at - at -f <job_script> now
I hope this helps anyone else who may have encountered similar issues.
Regards,
-Jack
Jack de Valpine wrote:
> Hi,
>
> I have been through the archives a bit and seen that this topic has
> come up in part but it is not clear if there is any resolution.
> Following is my description of what we are seeing.
>
> I have added rexecv into some code to start jobs on selected nodes.
> Normally I login into the openSSI (1.2.2 as reported by cluster -r)
> cluster via ssh. The job is started as follows:
>
> /usr/bin/nohup my_distrubuted_job &
>
> We use nohup on non ssi nodes so that the job will continue to process
> even if the user logs out of their ssh session or the ssh session goes
> down for some reason. So the theory is that it should work on the
> cluster. However, after exiting my ssh session and having to kill the
> xterm the session was running in as the exit just hangs on execution,
> upon logging back in I have discovered the following:
>
> * processes formerly running on other nodes are gone
> * only process running on node 1 continues
> * dmesg reports - reop_export_path: Can't export unlinked file
> /cluster/dev/pts1 (deleted)
> * lsof | grep pts - shows /dev/pts/1 (deleted) - repeated 4 times
> * ls /proc/<pid of main process>/fd - shows that:
> o 0 -> /dev/pts/1 (deleted)
> o 1 -> nohup.out
> o 2 -> nohup.out
> o 3 -> nohup.out
> o 4 -> pipe:[17098126]
> o 5 -> input_file
> o 6 -> pipe:[17098129]
>
> where fd's 0, 4 and 6 are shown in red, which I think means they
> are broken links.
>
> In an earlier thread on "Migration pains," it seems the problem
> relates to sshd disconnecting the pty which then frees up the pty when
> in fact it should not be. It sounded like there was a potential
> patch/resolution to this. Did this make it into 1.2.2? Does it need
> to be applied by hand?
>
> Note that if I do note logout of the ssh session then the job runs
> fine to completion.
>
> Thanks for your time and please let me know if there is any additional
> information that I can add to clarify the issue.
>
> -Jack de Valpine
> --
> # Jack de Valpine
> # president
> #
> # visarc incorporated
> # http://www.visarc.com
> #
> # channeling technology for superior design and construction
>
--
# Jack de Valpine
# president
#
# visarc incorporated
# http://www.visarc.com
#
# channeling technology for superior design and construction