Re: question about cluster

Scott Walters <[email protected]> Fri, 27 Jul 2012 13:19:36 -0400
Newsgroups gmane.linux.cluster.ssic.user
Message-ID <CAOae=fDwK+GrYHdA8KHswDxgwYa4Q6tBM9gO6JbaZhUJndX_nQ@mail.gmail.com>
Hello,

> i have a small cluster with about 96 core.
> i have oracle grid engine on it and we analyze mri images by fsl and
> freesurfer softwares.
> it is quit good but on some cases process are very huge and even worst case
> they are depend on other jobs results.
> i want to is it possible to use ssi solution like openssi to solve our
> problems.
>
> as i found on internet ssi solution simulate one big cpu for end user.

Not one big CPU.  One computer with lots of CPUs -- almost.  OpenSSI
lacks "shared memory".

> 1- is it possible to run fsl or freesurfer in that computer?

I don't know, but if you email me off of the list, I'll be happy to
create an account for you on my very small OpenSSI cluster and you can
try it for yourself and see.

> 2- is our analyzes run faster??

That depends.  Do these programs fork() or use threads?  If they
fork(), do they mmap() memory before they fork?

The answer may not be readily available.

> ps. this is my post/mail in this mailing this. i am very happy to be here.

Good to (virtually) meet you, nru.

Regards,
-scott

>
> best regards
> nru
>
> Sent from Yahoo! Mail on Android
>
>

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