Bug#1111649: apt: Fails to detect systemd on mdadm system during dist-upgrade
Thorsten Behrens <[email protected]>
| Newsgroups | gmane.linux.debian.apt.devel |
|---|---|
| Message-ID | <175570257634.1898758.3790949589786001378.reportbug__4155.43453288905$1755703640$gmane$org@aztec-prover-test-09> |
Package: apt Version: 3.0.3 Severity: important X-Debbugs-Cc: [email protected] Dear Maintainer, * What led up to the situation? I am coming from a Debian 12 system to Debian 13 using apt dist-upgrade. This gives me an error message that systemd cannot be found. The system uses mdadm and is a bare metal server by provider OVH. In some cases when testing this, grub EFI wasn't updated and restart failed. I can reproduce this and have a small zoo of test servers to continue testing, should you confirm this is a bug and wish to have me test a fix * What exactly did you do (or not do) that was effective (or ineffective)? ``` sudo sed -i 's/bookworm/trixie/g' /etc/apt/sources.list sudo find /etc/apt/sources.list.d -type f -exec sed -i 's/bookworm/trixie/g' {} \; sudo apt-get update && sudo apt-get dist-upgrade --autoremove -y ``` * What was the outcome of this action? apt showed an error message: ``` no systemd init system detected The root filesystem of this system was detected to be on a RAID device, so mdadm might be required to run during boot to properly start your system. Beginning with newer versions of the madm package, init-system integration is available for systemd only. This system seems to use an alternative init-system which might or might not leave your system unbootable and will not run any of the maintenance jobs automatically. ``` * What outcome did you expect instead? apt detects the existing Debian 12 systemd correctly and does what it needs to do to function on mdadm df -h output: ``` debian@aztec-prover-test-09:~$ df -h Filesystem Size Used Avail Use% Mounted on udev 63G 0 63G 0% /dev tmpfs 13G 2.0M 13G 1% /run /dev/md3 878G 26G 807G 4% / tmpfs 63G 0 63G 0% /dev/shm tmpfs 5.0M 0 5.0M 0% /run/lock /dev/md2 988M 191M 730M 21% /boot /dev/nvme1n1p1 511M 4.5M 507M 1% /boot/efi ``` lsblk output: ``` debian@aztec-prover-test-09:~$ lsblk NAME MAJ:MIN RM SIZE RO TYPE MOUNTPOINTS nvme0n1 259:0 0 894.3G 0 disk |-nvme0n1p1 259:2 0 511M 0 part |-nvme0n1p2 259:3 0 1G 0 part | `-md2 9:2 0 1022M 0 raid1 /boot |-nvme0n1p3 259:4 0 892.3G 0 part | `-md3 9:3 0 892.1G 0 raid1 / |-nvme0n1p4 259:5 0 512M 0 part `-nvme0n1p5 259:6 0 2M 0 part nvme1n1 259:1 0 894.3G 0 disk |-nvme1n1p1 259:7 0 511M 0 part /boot/efi |-nvme1n1p2 259:8 0 1G 0 part | `-md2 9:2 0 1022M 0 raid1 /boot |-nvme1n1p3 259:9 0 892.3G 0 part | `-md3 9:3 0 892.1G 0 raid1 / `-nvme1n1p4 259:10 0 512M 0 part ``` apt list for systemd: ``` debian@aztec-prover-test-09:~$ apt list --installed | grep systemd WARNING: apt does not have a stable CLI interface. Use with caution in scripts. libpam-systemd/stable,now 257.7-1 amd64 [installed] libsystemd-shared/stable,now 257.7-1 amd64 [installed,automatic] libsystemd0/stable,now 257.7-1 amd64 [installed] systemd-cryptsetup/stable,now 257.7-1 amd64 [installed,automatic] systemd-resolved/stable,now 257.7-1 amd64 [installed] systemd-sysv/stable,now 257.7-1 amd64 [installed,automatic] systemd/stable,now 257.7-1 amd64 [installed,automatic] ``` -- Package-specific info: -- apt-config dump -- APT ""; APT::Architecture "amd64"; APT::Build-Essential ""; APT::Build-Essential:: "build-essential"; APT::Install-Recommends "1"; APT::Install-Suggests "0"; APT::Key ""; APT::Key::Assert-Pubkey-Algo ">=rsa2048,ed25519,ed448,nistp256,nistp384,nistp512,brainpoolP256r1,brainpoolP320r1,brainpoolP384r1,brainpoolP512r1,secp256k1"; APT::Key::Assert-Pubkey-Algo::Next ">=rsa2048,ed25519,ed448,nistp256,nistp384,nistp512"; APT::Key::Assert-Pubkey-Algo::Future ">=rsa3072,ed25519,ed448"; APT::Sandbox ""; APT::Sandbox::User "_apt"; APT::NeverAutoRemove ""; APT::NeverAutoRemove:: "^firmware-linux.*"; APT::NeverAutoRemove:: "^linux-firmware$"; APT::NeverAutoRemove:: "^linux-image-[a-z0-9]*$"; APT::NeverAutoRemove:: "^linux-image-[a-z0-9]*-[a-z0-9]*$"; APT::VersionedKernelPackages ""; APT::VersionedKernelPackages:: "linux-.*"; APT::VersionedKernelPackages:: "kfreebsd-.*"; APT::VersionedKernelPackages:: "gnumach-.*"; APT::VersionedKernelPackages:: ".*-modules"; APT::VersionedKernelPackages:: ".*-kernel"; APT::Never-MarkAuto-Sections ""; APT::Never-MarkAuto-Sections:: "metapackages"; APT::Never-MarkAuto-Sections:: "tasks"; APT::Move-Autobit-Sections ""; APT::Move-Autobit-Sections:: "oldlibs"; APT::Periodic ""; APT::Periodic::Update-Package-Lists "1"; APT::Periodic::Download-Upgradeable-Packages "1"; APT::Periodic::CleanInterval "7"; APT::Periodic::Unattended-Upgrade "1"; APT::Architectures ""; APT::Architectures:: "amd64"; APT::Compressor ""; APT::Compressor::. ""; APT::Compressor::.::Name "."; APT::Compressor::.::Extension ""; APT::Compressor::.::Binary ""; APT::Compressor::.::Cost "0"; APT::Compressor::zstd ""; APT::Compressor::zstd::Name "zstd"; APT::Compressor::zstd::Extension ".zst"; APT::Compressor::zstd::Binary "zstd"; APT::Compressor::zstd::Cost "60"; APT::Compressor::zstd::CompressArg ""; APT::Compressor::zstd::CompressArg:: "-6"; APT::Compressor::zstd::UncompressArg ""; APT::Compressor::zstd::UncompressArg:: "-d"; APT::Compressor::lz4 ""; APT::Compressor::lz4::Name "lz4"; APT::Compressor::lz4::Extension ".lz4"; APT::Compressor::lz4::Binary "false"; APT::Compressor::lz4::Cost "50"; APT::Compressor::gzip ""; APT::Compressor::gzip::Name "gzip"; APT::Compressor::gzip::Extension ".gz"; APT::Compressor::gzip::Binary "gzip"; APT::Compressor::gzip::Cost "100"; APT::Compressor::gzip::CompressArg ""; APT::Compressor::gzip::CompressArg:: "-6n"; APT::Compressor::gzip::UncompressArg ""; APT::Compressor::gzip::UncompressArg:: "-d"; APT::Compressor::xz ""; APT::Compressor::xz::Name "xz"; APT::Compressor::xz::Extension ".xz"; APT::Compressor::xz::Binary "xz"; APT::Compressor::xz::Cost "200"; APT::Compressor::xz::CompressArg ""; APT::Compressor::xz::CompressArg:: "-6"; APT::Compressor::xz::UncompressArg ""; APT::Compressor::xz::UncompressArg:: "-d"; APT::Compressor::bzip2 ""; APT::Compressor::bzip2::Name "bzip2"; APT::Compressor::bzip2::Extension ".bz2"; APT::Compressor::bzip2::Binary "bzip2"; APT::Compressor::bzip2::Cost "300"; APT::Compressor::bzip2::CompressArg ""; APT::Compressor::bzip2::CompressArg:: "-6"; APT::Compressor::bzip2::UncompressArg ""; APT::Compressor::bzip2::UncompressArg:: "-d"; APT::Compressor::lzma ""; APT::Compressor::lzma::Name "lzma"; APT::Compressor::lzma::Extension ".lzma"; APT::Compressor::lzma::Binary "xz"; APT::Compressor::lzma::Cost "400"; APT::Compressor::lzma::CompressArg ""; APT::Compressor::lzma::CompressArg:: "--format=lzma"; APT::Compressor::lzma::CompressArg:: "-6"; APT::Compressor::lzma::UncompressArg ""; APT::Compressor::lzma::UncompressArg:: "--format=lzma"; APT::Compressor::lzma::UncompressArg:: "-d"; Dir "/"; Dir::State "var/lib/apt"; Dir::State::lists "lists/"; Dir::State::cdroms "cdroms.list"; Dir::State::extended_states "extended_states"; Dir::State::status "/var/lib/dpkg/status"; Dir::Cache "var/cache/apt"; Dir::Cache::archives "archives/"; Dir::Cache::srcpkgcache "srcpkgcache.bin"; Dir::Cache::pkgcache "pkgcache.bin"; Dir::Etc "etc/apt"; Dir::Etc::sourcelist "sources.list"; Dir::Etc::sourceparts "sources.list.d"; Dir::Etc::main "apt.conf"; Dir::Etc::netrc "auth.conf"; Dir::Etc::netrcparts "auth.conf.d"; Dir::Etc::parts "apt.conf.d"; Dir::Etc::preferences "preferences"; Dir::Etc::preferencesparts "preferences.d"; Dir::Etc::trustedparts "trusted.gpg.d"; Dir::Etc::apt-listchanges-main "listchanges.conf"; Dir::Etc::apt-listchanges-parts "listchanges.conf.d"; Dir::Boot "boot"; Dir::Usr "usr"; Dir::Bin ""; Dir::Bin::methods "/usr/lib/apt/methods"; Dir::Bin::solvers ""; Dir::Bin::solvers:: "/usr/lib/apt/solvers"; Dir::Bin::planners ""; Dir::Bin::planners:: "/usr/lib/apt/planners"; Dir::Bin::dpkg "/usr/bin/dpkg"; Dir::Bin::gzip "/bin/gzip"; Dir::Bin::bzip2 "/bin/bzip2"; Dir::Bin::xz "/usr/bin/xz"; Dir::Bin::lz4 "/usr/bin/lz4"; Dir::Bin::zstd "/usr/bin/zstd"; Dir::Bin::lzma "/usr/bin/xz"; Dir::Media ""; Dir::Media::MountPath "/media/apt"; Dir::Log "var/log/apt"; Dir::Log::Terminal "term.log"; Dir::Log::History "history.log"; Dir::Log::Planner "eipp.log.xz"; Dir::Ignore-Files-Silently ""; Dir::Ignore-Files-Silently:: "~$"; Dir::Ignore-Files-Silently:: "\.disabled$"; Dir::Ignore-Files-Silently:: "\.bak$"; Dir::Ignore-Files-Silently:: "\.dpkg-[a-z]+$"; Dir::Ignore-Files-Silently:: "\.ucf-[a-z]+$"; Dir::Ignore-Files-Silently:: "\.save$"; Dir::Ignore-Files-Silently:: "\.orig$"; Dir::Ignore-Files-Silently:: "\.distUpgrade$"; Acquire ""; Acquire::AllowInsecureRepositories "0"; Acquire::AllowWeakRepositories "0"; Acquire::AllowDowngradeToInsecureRepositories "0"; Acquire::cdrom ""; Acquire::cdrom::mount "/media/cdrom/"; Acquire::IndexTargets ""; Acquire::IndexTargets::deb ""; Acquire::IndexTargets::deb::Packages ""; Acquire::IndexTargets::deb::Packages::MetaKey "$(COMPONENT)/binary-$(ARCHITECTURE)/Packages"; Acquire::IndexTargets::deb::Packages::flatMetaKey "Packages"; Acquire::IndexTargets::deb::Packages::ShortDescription "Packages"; Acquire::IndexTargets::deb::Packages::Description "$(RELEASE)/$(COMPONENT) $(ARCHITECTURE) Packages"; Acquire::IndexTargets::deb::Packages::flatDescription "$(RELEASE) Packages"; Acquire::IndexTargets::deb::Packages::Optional "0"; Acquire::IndexTargets::deb::Translations ""; Acquire::IndexTargets::deb::Translations::MetaKey "$(COMPONENT)/i18n/Translation-$(LANGUAGE)"; Acquire::IndexTargets::deb::Translations::flatMetaKey "$(LANGUAGE)"; Acquire::IndexTargets::deb::Translations::ShortDescription "Translation-$(LANGUAGE)"; Acquire::IndexTargets::deb::Translations::Description "$(RELEASE)/$(COMPONENT) Translation-$(LANGUAGE)"; Acquire::IndexTargets::deb::Translations::flatDescription "$(RELEASE) Translation-$(LANGUAGE)"; Acquire::IndexTargets::deb-src ""; Acquire::IndexTargets::deb-src::Sources ""; Acquire::IndexTargets::deb-src::Sources::MetaKey "$(COMPONENT)/source/Sources"; Acquire::IndexTargets::deb-src::Sources::flatMetaKey "Sources"; Acquire::IndexTargets::deb-src::Sources::ShortDescription "Sources"; Acquire::IndexTargets::deb-src::Sources::Description "$(RELEASE)/$(COMPONENT) Sources"; Acquire::IndexTargets::deb-src::Sources::flatDescription "$(RELEASE) Sources"; Acquire::IndexTargets::deb-src::Sources::Optional "0"; Acquire::Changelogs ""; Acquire::Changelogs::URI ""; Acquire::Changelogs::URI::Origin ""; Acquire::Changelogs::URI::Origin::Debian "https://metadata.ftp-master.debian.org/changelogs/@CHANGEPATH@_changelog"; Acquire::Changelogs::URI::Origin::Ubuntu "https://changelogs.ubuntu.com/changelogs/pool/@CHANGEPATH@/changelog"; Acquire::Changelogs::AlwaysOnline ""; Acquire::Changelogs::AlwaysOnline::Origin ""; Acquire::Changelogs::AlwaysOnline::Origin::Ubuntu "1"; Acquire::Snapshots ""; Acquire::Snapshots::URI ""; Acquire::Snapshots::URI::Origin ""; Acquire::Snapshots::URI::Origin::Debian "https://snapshot.debian.org/archive/debian/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Origin::Ubuntu "https://snapshot.ubuntu.com/ubuntu/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Override ""; Acquire::Snapshots::URI::Override::Label ""; Acquire::Snapshots::URI::Override::Label::Debian-Security "https://snapshot.debian.org/archive/debian-security/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Host ""; Acquire::Snapshots::URI::Host::archive.ubuntu.com "https://snapshot.ubuntu.com/@PATH@/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Host::deb.debian.org "https://snapshot.debian.org/archive/@PATH@/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Host::.archive.ubuntu.com "https://snapshot.ubuntu.com/@PATH@/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Host::security.ubuntu.com "https://snapshot.ubuntu.com/@PATH@/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Host::ppa.launchpadcontent.net "https://snapshot.ppa.launchpadcontent.net/@PATH@/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Host::ppa.launchpad.net "https://snapshot.ppa.launchpadcontent.net/@PATH@/@SNAPSHOTID@/"; Acquire::Languages ""; Acquire::Languages:: "en"; Acquire::Languages:: "none"; Acquire::CompressionTypes ""; Acquire::CompressionTypes::xz "xz"; Acquire::CompressionTypes::bz2 "bzip2"; Acquire::CompressionTypes::lzma "lzma"; Acquire::CompressionTypes::gz "gzip"; Acquire::CompressionTypes::lz4 "lz4"; Acquire::CompressionTypes::zst "zstd"; DPkg ""; DPkg::Path "/usr/sbin:/usr/bin:/sbin:/bin"; DPkg::Pre-Install-Pkgs ""; DPkg::Pre-Install-Pkgs:: "/usr/bin/apt-listchanges --apt || test $? -lt 10"; DPkg::Pre-Install-Pkgs:: "/usr/sbin/dpkg-preconfigure --apt || true"; DPkg::Tools ""; DPkg::Tools::Options ""; DPkg::Tools::Options::/usr/bin/apt-listchanges ""; DPkg::Tools::Options::/usr/bin/apt-listchanges::Version "2"; DPkg::Tools::Options::/usr/bin/apt-listchanges::InfoFD "20"; DPkg::Post-Invoke ""; DPkg::Post-Invoke:: "test -x /usr/lib/needrestart/apt-pinvoke && /usr/lib/needrestart/apt-pinvoke || true"; Unattended-Upgrade ""; Unattended-Upgrade::Origins-Pattern ""; Unattended-Upgrade::Origins-Pattern:: "origin=Debian,codename=${distro_codename}-updates"; Unattended-Upgrade::Origins-Pattern:: "origin=Debian,codename=${distro_codename},label=Debian"; Unattended-Upgrade::Origins-Pattern:: "origin=Debian,codename=${distro_codename},label=Debian-Security"; Unattended-Upgrade::Origins-Pattern:: "origin=Debian,codename=${distro_codename}-security,label=Debian-Security"; Unattended-Upgrade::Origins-Pattern:: "origin=Docker"; Unattended-Upgrade::Mail "[email protected]"; Unattended-Upgrade::MailReport "only-on-error"; Unattended-Upgrade::Remove-Unused-Kernel-Packages "true"; Unattended-Upgrade::Remove-New-Unused-Dependencies "true"; Unattended-Upgrade::Automatic-Reboot "true"; Unattended-Upgrade::Automatic-Reboot-Time "17:00"; Binary "apt-config"; Binary::apt-cdrom ""; Binary::apt-cdrom::APT ""; Binary::apt-cdrom::APT::Internal ""; Binary::apt-cdrom::APT::Internal::OpProgress ""; Binary::apt-cdrom::APT::Internal::OpProgress::EraseLines "0"; Binary::apt ""; Binary::apt::APT ""; Binary::apt::APT::Color "1"; Binary::apt::APT::Output-Version "30"; Binary::apt::APT::Cache ""; Binary::apt::APT::Cache::Show ""; Binary::apt::APT::Cache::Show::Version "2"; Binary::apt::APT::Cache::AllVersions "0"; Binary::apt::APT::Cache::ShowVirtuals "1"; Binary::apt::APT::Cache::Search ""; Binary::apt::APT::Cache::Search::Version "2"; Binary::apt::APT::Cache::ShowDependencyType "1"; Binary::apt::APT::Cache::ShowVersion "1"; Binary::apt::APT::Get ""; Binary::apt::APT::Get::Upgrade-Allow-New "1"; Binary::apt::APT::Get::Update ""; Binary::apt::APT::Get::Update::InteractiveReleaseInfoChanges "1"; Binary::apt::APT::Cmd ""; Binary::apt::APT::Cmd::Show-Update-Stats "1"; Binary::apt::APT::Cmd::Pattern-Only "1"; Binary::apt::APT::Keep-Downloaded-Packages "0"; Binary::apt::DPkg ""; Binary::apt::DPkg::Progress-Fancy "1"; Binary::apt::DPkg::Lock ""; Binary::apt::DPkg::Lock::Timeout "-1"; Binary::apt::Pager "1"; CommandLine ""; CommandLine::AsString "apt-config dump"; -- (no /etc/apt/preferences present) -- -- (no /etc/apt/preferences.d/* present) -- -- /etc/apt/sources.list -- # See /etc/apt/sources.list.d/debian.sources -- /etc/apt/sources.list.d/debian.sources -- Types: deb deb-src URIs: mirror+file:///etc/apt/mirrors/debian.list Suites: trixie trixie-updates trixie-backports Components: main contrib non-free-firmware Signed-By: /usr/share/keyrings/debian-archive-keyring.gpg Types: deb deb-src URIs: mirror+file:///etc/apt/mirrors/debian-security.list Suites: trixie-security Components: main contrib non-free-firmware Signed-By: /usr/share/keyrings/debian-archive-keyring.gpg -- /etc/apt/sources.list.d/download_docker_com_linux_debian.list -- deb [arch=amd64 signed-by=/etc/apt/keyrings/docker.gpg] https://download.docker.com/linux/debian trixie stable -- /etc/apt/sources.list.d/teleport.list -- deb [signed-by=/usr/share/keyrings/teleport-archive-keyring.asc] https://apt.releases.teleport.dev/debian trixie stable/cloud -- System Information: Debian Release: 13.0 APT prefers stable-updates APT policy: (500, 'stable-updates'), (500, 'stable-security'), (500, 'stable') Architecture: amd64 (x86_64) Kernel: Linux 6.1.0-38-amd64 (SMP w/32 CPU threads; PREEMPT) Locale: LANG=en_US.UTF-8, LC_CTYPE=C.UTF-8 (charmap=locale: Cannot set LC_MESSAGES to default locale: No such file or directory locale: Cannot set LC_ALL to default locale: No such file or directory UTF-8), LANGUAGE not set Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled Versions of packages apt depends on: ii adduser 3.152 ii base-passwd 3.6.7 ii debian-archive-keyring 2025.1 ii libapt-pkg7.0 3.0.3 ii libc6 2.41-12 ii libgcc-s1 14.2.0-19 ii libseccomp2 2.6.0-2 ii libssl3t64 3.5.1-1 ii libstdc++6 14.2.0-19 ii libsystemd0 257.7-1 ii sqv 1.3.0-3 Versions of packages apt recommends: ii ca-certificates 20250419 Versions of packages apt suggests: pn apt-doc <none> pn aptitude | synaptic | wajig <none> ii dpkg-dev 1.22.21 ii gnupg 2.4.7-21 pn powermgmt-base <none> -- debconf information: perl: warning: Setting locale failed. perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LC_CTYPE = "C.UTF-8", LC_NUMERIC = (unset), LC_COLLATE = (unset), LC_TIME = (unset), LC_MESSAGES = (unset), LC_MONETARY = (unset), LC_ADDRESS = (unset), LC_IDENTIFICATION = (unset), LC_MEASUREMENT = (unset), LC_PAPER = (unset), LC_TELEPHONE = (unset), LC_NAME = (unset), LANG = "en_US.UTF-8" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C").