Re: Could some SnpEff user from the community please ping authors

Pierre Gruet <[email protected]>
Newsgroups gmane.linux.debian.devel.medical
Message-ID <[email protected]>
Hi Nilesh,

Le 05/12/2023 à 21:30, Nilesh Patra a écrit :
> On Tue, Nov 28, 2023 at 05:54:30PM +0100, Andreas Tille wrote:
>> I wonder whether some people from the community might be able to join
>> our attempt to get this issue fixed and raise their voice inside the
>> Github issue (or use other channels) to get this finally fixed.  I guess
>> the problem does not only occure in snippy test suite but also in other
>> pipelines so the community might be affected by this issue.
>>
>>
>> [1] https://github.com/pcingola/SnpEff/issues/455
> 
> Sometimes just tagging upstream author does wonders :)

Yeah! Thanks for having done so. I also saw his answer today.

I have the test case of Andreas' colleagues settled down on my computer, 
I will take time in the upcoming days to check that upstream's trick can 
allow us to circumvent #1029202.

> 
> They have replied and the (upstream) bug has been closed.
> BTW, are you able to still reproduce (without any fixes for snpeff/snippy) #1031465?
> 
> For me, it is working fine in an unstable chroot (including autopkgtests)
> and maybe could be closed.

Thanks also for having verified this; if you checked this in a chroot I 
guess you can just close the bug.

> 
> Best,
> Nilesh

Best,

-- 
Pierre
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