[Advent Bug Squashing] My bug fixes during advent calendar

Hi,

Instead of sending each bug fix mail to the list, I thought of sending
a consolidated list instead, for the advent BSP, starting Dec 1.

+----------+------------------+-----------+
| #1058558 | seqkit           | RC        |
+----------+------------------+-----------+
| #1046668 | seqkit           | minor     |
+----------+------------------+-----------+
| #1058011 | sorted-nearest   | important |
+----------+------------------+-----------+
| #1056411 | imbalanced-learn | RC        |
+----------+------------------+-----------+
| #1056464 | python-csb       | important |
+----------+------------------+-----------+
| #1056408 | hdmf             | important |
+----------+------------------+-----------+
| #1054602 | mosdepth         | important |
+----------+------------------+-----------+
| #1056041 | tombo            | important |
+----------+------------------+-----------+
| #1056892 | tombo            | important |
+----------+------------------+-----------+
| #1056234 | circlator        | important |
+----------+------------------+-----------+
| #1056037 | python-sqt       | important |
+----------+------------------+-----------+

I was busier with other packages meanwhile, but it was fun anyway.

Cheers!

Best,
Nilesh

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