Re: ClonalFrameML: Dataset with less computational resourses

Xavier Didelot <[email protected]>
Newsgroups gmane.linux.debian.devel.medical
Message-ID <CAEaAq6TxaB_ZKWgW0kPFpz28piJ3u97vuSOHxAfUKrO2nFCjdw@mail.gmail.com>
Hi Israel,

Cf attached files test.fasta and test.nwk
The command
ClonalFrameML test.nwk test.fasta out
will take less than a second to run.

Best wishes,
Xavier

On Mon, 29 Jan 2024 at 10:20, Komolehin Israel <[email protected]>
wrote:

> Hi Xavier,
>
> I hope this email finds you well. I'm currently involved in QA testing for
> med-team packages, including ClonalFrameML. We've encountered a challenge
> with the dataset provided upstream, which requires around 12 hours of
> computing.
>
> To streamline our testing process, would it be possible to provide a
> lightweight dataset that demands less computing power? Your assistance in
> this matter would significantly aid our testing efforts.
>
> Thank you for your help.
>
> Best regards,
> Israel
>
test.nwk (application/octet-stream, 39 B) - not displayed
test.fasta (application/octet-stream, 80 B) - not displayed
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